DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and Sv2b

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001103223.1 Gene:Sv2b / 64176 MGIID:1927338 Length:683 Species:Mus musculus


Alignment Length:600 Identity:118/600 - (19%)
Similarity:201/600 - (33%) Gaps:218/600 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 DECSETEFDTSVF-----------QSTIITEWNLTCESKQLASLSQS-------IVMLGILFGSI 124
            |||....|..::|           ....:..:.|....|.:. ||.|       ||.||::.|:.
Mouse   100 DECGHGRFQWTLFFVLGLALMADGVEIFVVSFALPSAEKDMC-LSSSKKGMLGLIVYLGMMAGAF 163

  Fly   125 LFGMFADRYGRRPAFLTCCFMQL-ITGLIVCVSPY---YWFYCLFRFLVAVATAGTMTTSFVLLM 185
            :.|..||:.||:...    .|.| |......:|.:   |..:...|.:..:...|::...|....
Mouse   164 ILGGLADKLGRKKVL----SMSLAINASFASLSSFVQGYGAFLFCRLISGIGIGGSLPIVFAYFS 224

  Fly   186 EIVGPKKRE----------MVAILYQ-------IP-----FNIGHASLALFAYFIREWRWFQFSI 228
            |.:..:||.          |...:|.       ||     |::|      ..|....||.|....
Mouse   225 EFLSREKRGEHLSWLGIFWMTGGIYASAMAWSIIPHYGWGFSMG------TNYHFHSWRVFVIVC 283

  Fly   229 TIFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCN---KAPTETI-------RP----- 278
            .:.:.|.::.:..:|||||:|...||.|::..||:::...|   |...|.:       .|     
Mouse   284 ALPATVSMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNMRAKGTPEKVFTVSHIKTPKQMDE 348

  Fly   279 --EIEAAYGALAARQPVKKGTVVDLFRT-----------PYMRIKTIFMANNWLVVCMVYYGTA- 329
              ||:::.|....|..|:..|:   |:.           || |:.|:.:|..|..:.:.|||.. 
Mouse   349 FIEIQSSTGTWYQRWLVRFMTI---FKQVWDNALYCVMGPY-RMNTLILAVVWFTMALSYYGLTV 409

  Fly   330 ------------QYVSAL---------GGNI---------------------------------- 339
                        :|.|.:         |..|                                  
Mouse   410 WFPDMIRYFQDEEYKSKMKVFFGEHVHGATINFTMENQIHQHGKLVNDKFIKMYFKHVLFEDTFF 474

  Fly   340 ---------------------------------------FISNA--------------------- 344
                                                   ||::.                     
Mouse   475 DKCYFEDVTSTDTYFKNCTIESTTFYNTDLYKHKFINCRFINSTFLEQKEGCHMDFEEDNDFLIY 539

  Fly   345 IAAGVG----IPGTCLCALMTKYLGRKKTLLLSNGCSALGLILLACLSTQAEAVRVTCATIGLF- 404
            :.:.:|    :||..:.||:...:||.|.:..|...||:....|...::::..:...|    || 
Mouse   540 LVSFLGSLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCFFLFFGNSESAMIGWQC----LFC 600

  Fly   405 GASITFPNVY-LYGGELFPTVVRSSGVGLCSMVGRIGSIVAPLIVDLAAY-GLW-VAPLIFGIFS 466
            |.||...|.. :...||:||..|::..|:.:.:.:.|:|:...|  .|:: |:. |.|::....|
Mouse   601 GTSIAAWNALDVITVELYPTNQRATAFGILNGLCKFGAILGNTI--FASFVGITKVVPILLAAAS 663

  Fly   467 IL-AMLGTIFLPETR 480
            :: ..|..:.|||||
Mouse   664 LVGGGLIALRLPETR 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 114/592 (19%)
MFS 87..477 CDD:119392 109/586 (19%)
Sv2bNP_001103223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73
synapt_SV2 8..683 CDD:130366 117/599 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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