DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and Slc22a4

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_071606.1 Gene:Slc22a4 / 64037 RGDID:621149 Length:553 Species:Rattus norvegicus


Alignment Length:540 Identity:143/540 - (26%)
Similarity:246/540 - (45%) Gaps:73/540 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DPIISQIGDFRRYQLFFFFIVLLCKFGTGWHTLGHIFLAA------------------------- 61
            |.:|:.:||:..:|...||::.......|::.:..:|||.                         
  Rat     5 DEVIAFLGDWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVPHTVNLSSAWRNHSIPL 69

  Fly    62 ------PTPLSCKTENVT----------DPCSD---------ECSE-TEFDTSVFQSTIITEWNL 100
                  ..|.||:...:.          :|..|         .|.: .|:...||.|||:|||||
  Rat    70 ETKDGRQVPQSCRRYRLATIANFSALGLEPGLDVDLEQLEQESCLDGWEYSKDVFLSTIVTEWNL 134

  Fly   101 TCESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLF 165
            .||......|:.|:..:|:|.||.:.|..:||:||:........:|.....:...|..:..:.:.
  Rat   135 VCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGFSFVQIFSTNWEMFTVL 199

  Fly   166 RFLVAVATAGTMTTSFVLLMEIVGPKKREMVAILYQIP-FNIGHASLALFAYFIREWRWFQFSIT 229
            ..:|.:........:|:|..||:....|.:.:.|.... |.||:..|.|||||||:||....::|
  Rat   200 FAIVGMGQISNYVVAFILGTEILSKSVRILFSTLGVCTFFAIGYMVLPLFAYFIRDWRMLLLALT 264

  Fly   230 IFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCN--KAPTETIRP-EIEAAYGALAARQ 291
            :..:..|...|.:|||||||.:..:.:::.:|::|.||.|  .||.....| |::...   :.:|
  Rat   265 LPGLFCVPLWWFIPESPRWLISQRRFEEAEQIIQKAAKMNGIMAPAVIFDPLELQELN---SLKQ 326

  Fly   292 PVKKGTVVDLFRTPYMRIKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAGVGIPGTCL 356
              :|..::|||:|..:...|:.....|::..:.|:..:..|..|.|:::::..::..:.:|....
  Rat   327 --QKVFILDLFKTRNIATITVMSVMLWMLTSVGYFALSLNVPNLHGDVYLNCFLSGLIEVPAYFT 389

  Fly   357 CALMTKYLGRK----KTLLLSNGCSALGLILLACLSTQAEAVRVTCATIGLFGASITFPNVYLYG 417
            ..|:.:.|.|:    ..|....|.    |:|:..:......|.:....:|.||.:..|..:|::.
  Rat   390 AWLLLRTLPRRYIIAGVLFWGGGV----LLLVQVVPEDYNFVSIGLVMLGKFGVTSAFSMLYVFT 450

  Fly   418 GELFPTVVRSSGVGLCSMVGRIGSIVAPLIVDLAAYGLWVAPLIFGIFSILAMLGTIFLPETRGT 482
            .||:||:||:..||:.||..|:|||:||..|.|.||...:..::.|..::|..:.|:|.||:.|.
  Rat   451 AELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLTVLIGIITLFFPESFGV 515

  Fly   483 PLPETLED-----GETFGRK 497
            .|||.||.     |...|:|
  Rat   516 TLPENLEQMQKVRGFRCGKK 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 119/409 (29%)
MFS 87..477 CDD:119392 114/397 (29%)
Slc22a4NP_071606.1 2A0119 12..519 CDD:273328 134/515 (26%)
MFS 123..510 CDD:119392 114/395 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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