DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and sv2a

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_696434.2 Gene:sv2a / 568033 ZFINID:ZDB-GENE-131001-1 Length:733 Species:Danio rerio


Alignment Length:560 Identity:105/560 - (18%)
Similarity:174/560 - (31%) Gaps:194/560 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 CESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFR 166
            |.|:....:...||.||::.|:.::|..|||.|||...|....:..:..........|..:...|
Zfish   190 CLSEPNKGMLGLIVYLGMMVGAFVWGGLADRIGRRQTLLISLSINSVFAFFSSFVQGYSSFLFCR 254

  Fly   167 FLVAVATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIGHA 209
            .|..|...|::...|....|.:..:||.          |:..:|.       ||     |.:|. 
Zfish   255 LLSGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGS- 318

  Fly   210 SLALFAYFIREWRWFQFSITIFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCNK---- 270
                 ||....||.|.......|:..:..:..:|||||:....||.|::..||:::...|.    
Zfish   319 -----AYQFHSWRVFVLVCAFPSVAAIAALTTMPESPRFYLENGKHDEAWMILKQVHDTNMRAKG 378

  Fly   271 --------APTETIR--PEIEAAYGALAA---RQPVKK--------GTVVDLFRTPYMRIKTIFM 314
                    ...:|::  .|:....|...|   |..:|.        |..:.:|...|.||..:.|
Zfish   379 YPERVFSVTTIKTVKQMDELVDMGGEATAWHQRWRIKLTNLFHQVWGNFLTVFNPEYRRITYMMM 443

  Fly   315 ANNWLVVCMVYYG---------------------------------------------------- 327
            | .|..:...|||                                                    
Zfish   444 A-VWFSMSFSYYGLTVWFPDMIKYLQKQEYSSRTKVFIKEKVEHVTFNFTLENQIHRNGEYFNNK 507

  Fly   328 --------------------------------TAQYVSALGGN---------------------- 338
                                            ...::|.|..|                      
Zfish   508 FLNLKMKSMVFEDSLFEECYFEDITSSNTFFRNCTFISTLFYNTDLFKYRLINSKLINSTFLHNK 572

  Fly   339 ---------------IFISNAIAAGVGIPGTCLCALMTKYLGRKKTLLLSNGCSALGLILLACLS 388
                           |:..:.:.....:||..:.||:...:||.:.|..|:..|.:....|:..:
Zfish   573 EGCMLDFSDENNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVISCVSCFFLSFGN 637

  Fly   389 TQAEAVRVTCATIGLFGA-SITFPNVY-LYGGELFPTVVRSSGVG----LCSMVGRIGSIVAPLI 447
            :::..:.:.|    |||. ||...|.. :...||:|:..|::..|    ||.:...:|..:....
Zfish   638 SESAMIALLC----LFGGISIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFQSF 698

  Fly   448 VDLAAYGLWVAPLIFGIFSILAMLGTIF---LPETRGTPL 484
            |.:..    ..|::|...::.|  |:..   ||||||..|
Zfish   699 VGITK----AVPILFASGALAA--GSFLALKLPETRGQVL 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 105/560 (19%)
MFS 87..477 CDD:119392 98/551 (18%)
sv2aXP_696434.2 synapt_SV2 1..733 CDD:130366 105/560 (19%)
MFS 162..725 CDD:119392 98/551 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.