DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and svopa

DIOPT Version :10

Sequence 1:NP_611451.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_005165254.1 Gene:svopa / 559162 ZFINID:ZDB-GENE-060526-336 Length:549 Species:Danio rerio


Alignment Length:494 Identity:120/494 - (24%)
Similarity:199/494 - (40%) Gaps:85/494 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 IFLAAPTPLSCKTENVTDP---CSDECSETEFDTSVFQSTIIT--EW---------------NLT 101
            :.||...|:..:..|.||.   ..|......|.|..::.:|:|  .|               .|.
Zfish    48 VSLADGAPVPREFANPTDDTFMVEDAVEAIGFGTFQWKLSILTGLSWMADAMEMMILSILAPQLH 112

  Fly   102 CE----SKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFY 162
            ||    |.::|.|: |:|.:|::..|.|:|..:|:|||:..........|..|::...:|.|.:.
Zfish   113 CEWALPSWEVALLT-SVVFIGMMISSSLWGNISDKYGRKTGLKMSVLWTLFYGILSAFAPIYGWI 176

  Fly   163 CLFRFLVAVATAGTMTTSFVLLMEIVGPKKREMVAILYQIPFNIGHASLALFAYFIRE---WRWF 224
            ...|.||.....|. ..|..|..|.:..:.|....:|.:|.:.:|.....|.|..:..   |||.
Zfish   177 LFLRALVGFGIGGA-PQSVTLYAEFLPMRSRATCILLIEIFWALGTVFEVLLAILVMPTLGWRWL 240

  Fly   225 QFSITIFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCNKAPTETIRPEIEAAYGALAA 289
            ....||...:|....:.:|||.|:...||..:|::..|::||..|..|         ...|.|..
Zfish   241 LALSTIPLFIFAFLCFWLPESARYDVLTGNQEKALNTLKRIAAENNVP---------MPLGKLIV 296

  Fly   290 RQPVKKGTVVDLFRTPYMRIKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAGVG---- 350
            .:...:|.:.||| :|:.|..|:.:...|......|||    |..|...:|....:..|..    
Zfish   297 ARQEDRGKIQDLF-SPHFRWTTVLLWFIWFSNAFSYYG----VVLLTTELFQEGGVCGGAKGSKM 356

  Fly   351 IPGTCLCALMTKY-----------------------------LGRKKTLLLSNGCSALGLI-LLA 385
            .||   |:|..||                             |||:||:.|.....:|.:: |.:
Zfish   357 EPG---CSLECKYLNSDDYKDLLWTTLSEFPGLLVTLWAIDRLGRRKTMALCFFVFSLCIVPLYS 418

  Fly   386 CLSTQAEAVRVTCATIGLFGASITFPNVYLYGGELFPTVVRSSGVGLCSMVGRIGSIVAPLIVD- 449
            |:...:..|.:..|...:.|.   |...|:|..|::||..|:.|:|..|.:.|:|:::.|.:.. 
Zfish   419 CVGRTSLTVFIFIARAFIAGG---FQAAYVYTPEVYPTATRALGLGTSSGMARVGALITPFVAQV 480

  Fly   450 LAAYGLWVAPLIFGIFSILAMLGTIFLP-ETRGTPLPET 487
            :....:::...::....:||.:.:..|| ||.|..|.|:
Zfish   481 MLESSVYLTLSVYCCCCLLAAIASCALPIETTGRGLQES 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_611451.1 MFS_SLC22 82..477 CDD:340875 106/453 (23%)
svopaXP_005165254.1 MFS_SVOP 87..508 CDD:340999 104/442 (24%)

Return to query results.
Submit another query.