DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and svopa

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_005165254.1 Gene:svopa / 559162 ZFINID:ZDB-GENE-060526-336 Length:549 Species:Danio rerio


Alignment Length:494 Identity:120/494 - (24%)
Similarity:199/494 - (40%) Gaps:85/494 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 IFLAAPTPLSCKTENVTDP---CSDECSETEFDTSVFQSTIIT--EW---------------NLT 101
            :.||...|:..:..|.||.   ..|......|.|..::.:|:|  .|               .|.
Zfish    48 VSLADGAPVPREFANPTDDTFMVEDAVEAIGFGTFQWKLSILTGLSWMADAMEMMILSILAPQLH 112

  Fly   102 CE----SKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFY 162
            ||    |.::|.|: |:|.:|::..|.|:|..:|:|||:..........|..|::...:|.|.:.
Zfish   113 CEWALPSWEVALLT-SVVFIGMMISSSLWGNISDKYGRKTGLKMSVLWTLFYGILSAFAPIYGWI 176

  Fly   163 CLFRFLVAVATAGTMTTSFVLLMEIVGPKKREMVAILYQIPFNIGHASLALFAYFIRE---WRWF 224
            ...|.||.....|. ..|..|..|.:..:.|....:|.:|.:.:|.....|.|..:..   |||.
Zfish   177 LFLRALVGFGIGGA-PQSVTLYAEFLPMRSRATCILLIEIFWALGTVFEVLLAILVMPTLGWRWL 240

  Fly   225 QFSITIFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCNKAPTETIRPEIEAAYGALAA 289
            ....||...:|....:.:|||.|:...||..:|::..|::||..|..|         ...|.|..
Zfish   241 LALSTIPLFIFAFLCFWLPESARYDVLTGNQEKALNTLKRIAAENNVP---------MPLGKLIV 296

  Fly   290 RQPVKKGTVVDLFRTPYMRIKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAGVG---- 350
            .:...:|.:.||| :|:.|..|:.:...|......|||    |..|...:|....:..|..    
Zfish   297 ARQEDRGKIQDLF-SPHFRWTTVLLWFIWFSNAFSYYG----VVLLTTELFQEGGVCGGAKGSKM 356

  Fly   351 IPGTCLCALMTKY-----------------------------LGRKKTLLLSNGCSALGLI-LLA 385
            .||   |:|..||                             |||:||:.|.....:|.:: |.:
Zfish   357 EPG---CSLECKYLNSDDYKDLLWTTLSEFPGLLVTLWAIDRLGRRKTMALCFFVFSLCIVPLYS 418

  Fly   386 CLSTQAEAVRVTCATIGLFGASITFPNVYLYGGELFPTVVRSSGVGLCSMVGRIGSIVAPLIVD- 449
            |:...:..|.:..|...:.|.   |...|:|..|::||..|:.|:|..|.:.|:|:::.|.:.. 
Zfish   419 CVGRTSLTVFIFIARAFIAGG---FQAAYVYTPEVYPTATRALGLGTSSGMARVGALITPFVAQV 480

  Fly   450 LAAYGLWVAPLIFGIFSILAMLGTIFLP-ETRGTPLPET 487
            :....:::...::....:||.:.:..|| ||.|..|.|:
Zfish   481 MLESSVYLTLSVYCCCCLLAAIASCALPIETTGRGLQES 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 112/461 (24%)
MFS 87..477 CDD:119392 105/448 (23%)
svopaXP_005165254.1 2A0115 82..482 CDD:273327 102/421 (24%)
MFS 88..508 CDD:119392 104/441 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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