DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and F23F12.13

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001033356.1 Gene:F23F12.13 / 3896740 WormBaseID:WBGene00044455 Length:528 Species:Caenorhabditis elegans


Alignment Length:554 Identity:124/554 - (22%)
Similarity:219/554 - (39%) Gaps:150/554 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RRYQLFFF---FIVLLCKFGTGWHTLGHIFLAAPTPLSCKTENVTDP----------------CS 77
            |.:.|.||   |.:..|     ...:..||......|||     .||                ||
 Worm     8 RFHWLCFFLWQFALFFC-----CQQIFSIFYNFSPGLSC-----DDPSFQFSKPKCKLSKSEICS 62

  Fly    78 D---ECSETEFDTSVFQSTIITEWNLTCESKQL-ASLSQSIVMLGILFGSILFGMFADRYGRRPA 138
            :   .||:...:.:.|.| ::.::.:.|.:|.. |:...:|..:|:|.|:|.:|...|.:||:|.
 Worm    63 ELTANCSKIVIEEAPFHS-MVQDFKMFCGTKAYDAAWVATIQFIGVLIGAITYGHLGDHFGRKPV 126

  Fly   139 FLTCCFMQLITGLIVCVSPYYWFYCLFRFLVAVATAGTMTTSFVLLMEIVGPKKREMVAILYQIP 203
            ......:.::.|:....:|.:..:..|||:|..:.|..:...:..::|.:.|::|    :..:..
 Worm   127 SFFGISVGILFGVASGFAPSWEVFAAFRFIVGTSIASILIVFYAYILEFIEPEQR----VFLRSF 187

  Fly   204 FNIGHASL--ALFAYFIREWRWFQFSITIFSIVFVIYIWLVPESPRWLFTTGKL----------- 255
            ||.|:|.|  .|..:....||....:.::.|:..:..:.::||||:| |.|.|.           
 Worm   188 FNWGYARLVFTLACFICGYWRSAAIATSLLSLPILPVLLILPESPKW-FNTKKRFRDARAAEKRV 251

  Fly   256 ------------DKSIKILEKIAKCNKAPTETIRPEIEAAYGALAARQPVKKGTVVDLFRTPYMR 308
                        |:||:|.||:.:                       :..|..|:.|||.:..:.
 Worm   252 AWLSGIPYVNDEDQSIEISEKLEE-----------------------KSTKIYTMKDLFTSWTIA 293

  Fly   309 IKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAGVG-------------IPG------- 353
            .:||.:.:.|....:..:|:......|.||.::|..::..|.             :|.       
 Worm   294 YRTIVVGSLWFSTSLSAFGSDLNSGNLAGNFYLSQFVSGAVTAFAKIFVFLLDTYVPSFDRRRLH 358

  Fly   354 --------TCLCALMTKYLGRKKTLLLSNGCSALGLILLACLSTQAEAVRVTCATIGLFGAS--- 407
                    .|.|.:|.      ..:|..:.|.:.|...||.:            .|.:.|.|   
 Worm   359 QYPQIAMILCYCVIMV------LMILPESDCGSQGSRDLAII------------IINIIGVSFIE 405

  Fly   408 ITFPNVYLYGGELFPTVVRSSGVGLCSMVGRIGSIVAPLIVDL------AAYGLWVAPLIFGIFS 466
            ||:...||...|.|||.:|:.|:|.||::.|.|:::||.:..|      |.|.     ::..|.:
 Worm   406 ITWDACYLVAVECFPTKIRTIGIGTCSLLARTGALLAPQMAYLSDIYRPAPYA-----VVCSIGT 465

  Fly   467 ILAMLGTIFLPETRGTPLPETLEDGE--TFGRKK 498
            |..::..:|||:|:|..| ..|:..|  .:.|||
 Worm   466 ISLLISCVFLPDTKGVDL-AALDPTEELDYDRKK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 102/464 (22%)
MFS 87..477 CDD:119392 97/452 (21%)
F23F12.13NP_001033356.1 MFS 74..476 CDD:391944 97/453 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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