DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and Slc22a4

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_062661.1 Gene:Slc22a4 / 30805 MGIID:1353479 Length:553 Species:Mus musculus


Alignment Length:540 Identity:143/540 - (26%)
Similarity:246/540 - (45%) Gaps:73/540 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DPIISQIGDFRRYQLFFFFIVLLCKFGTGWHTLGHIFLAA------------------------- 61
            |.:|:.:|::..:|...||::.......|::.:..:|||.                         
Mouse     5 DEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVPDTVNLSSSWRNHSIPL 69

  Fly    62 ------PTPLSCKTENVT----------DPCSD---------ECSE-TEFDTSVFQSTIITEWNL 100
                  ..|.||:...:.          :|..|         .|.: .|:|..:|.|||:|||||
Mouse    70 ETKDGRQVPQSCRRYRLATIANFSAMGLEPGQDVDLEQLEQESCLDGWEYDKDIFLSTIVTEWNL 134

  Fly   101 TCESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLF 165
            .||......|:.|:..:|:|.||.:.|..:||:||:........:|.....:...|..:..:.:.
Mouse   135 VCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGFSFVQIFSTNWEMFTVL 199

  Fly   166 RFLVAVATAGTMTTSFVLLMEIVGPKKREMVAILYQIP-FNIGHASLALFAYFIREWRWFQFSIT 229
            ..:|.:........:|:|..||:....|.:.:.|.... |.||:..|.|||||||:||....::|
Mouse   200 FAIVGMGQISNYVVAFILGTEILSKSVRIIFSTLGVCTFFAIGYMVLPLFAYFIRDWRMLLLALT 264

  Fly   230 IFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCNK--APTETIRP-EIEAAYGALAARQ 291
            :..:..|...|.:|||||||.:..:..::.:|::|.||.|.  ||.....| |::...   :.:|
Mouse   265 LPGLFCVPLWWFIPESPRWLISQRRFAEAEQIIQKAAKMNSIVAPAGIFDPLELQELN---SLKQ 326

  Fly   292 PVKKGTVVDLFRTPYMRIKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAGVGIPGTCL 356
              :|..::|||||..:...|:.....|::..:.|:..:..|..|.|:::::..::..:.:|....
Mouse   327 --QKVIILDLFRTRNIATITVMAVMLWMLTSVGYFALSLNVPNLHGDVYLNCFLSGLIEVPAYFT 389

  Fly   357 CALMTKYLGRK----KTLLLSNGCSALGLILLACLSTQAEAVRVTCATIGLFGASITFPNVYLYG 417
            ..|:.:.|.|:    ..|....|.    |:|:..:......|.:....:|.||.:..|..:|::.
Mouse   390 AWLLLRTLPRRYIIAGVLFWGGGV----LLLIQVVPEDYNFVSIGLVMLGKFGITSAFSMLYVFT 450

  Fly   418 GELFPTVVRSSGVGLCSMVGRIGSIVAPLIVDLAAYGLWVAPLIFGIFSILAMLGTIFLPETRGT 482
            .||:||:||:..||:.||..|:|||:||..|.|.||...:..::.|..::|..:.|:|.||:.|.
Mouse   451 AELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLTVLIGIITLFFPESFGV 515

  Fly   483 PLPETLED-----GETFGRK 497
            .|||.||.     |...|:|
Mouse   516 TLPENLEQMQKVRGFRCGKK 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 120/409 (29%)
MFS 87..477 CDD:119392 114/397 (29%)
Slc22a4NP_062661.1 2A0119 12..519 CDD:273328 134/515 (26%)
MFS 123..510 CDD:119392 114/395 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.940

Return to query results.
Submit another query.