DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and str-176

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001294210.1 Gene:str-176 / 13197055 WormBaseID:WBGene00006220 Length:540 Species:Caenorhabditis elegans


Alignment Length:539 Identity:126/539 - (23%)
Similarity:234/539 - (43%) Gaps:64/539 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RPQDPKA--PKPLKPVTKTGDPIISQ-----IGDFRRYQLFFFFIVLLCKFGTGWHTLGH---IF 58
            :|:|.:|  ..|:.| .|:.:.::.:     :.||...:.:...::|:.:......|...   :|
 Worm    20 KPEDVEAVVQTPIVP-KKSLEMMVEEKKVGSLDDFITLRWYCMLVLLMAELTAFTATASSKVMVF 83

  Fly    59 LAA-PTPLSC------------KTENVTDPCSDECSETEFDTSVFQSTIITEWNLTCESKQLASL 110
            ..| |..:.|            ...|.|:.|       |.|......::..|:|..||..:....
 Worm    84 AGANPAVIGCGGTPLNGCHELAAFRNETNLC-------EPDLRYQFKSVQVEFNYICEDAKKVKN 141

  Fly   111 SQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFRFLVAVATAG 175
            :.::...|:|.|:.:||..:|.:|||.|.|.......:...|...||..:::.::|.|..|.|.|
 Worm   142 TITVQTFGVLVGAAIFGQVSDTFGRRKALLISTLGNGLFNWITAYSPDLFYFMVWRTLAGVFTGG 206

  Fly   176 TMTTSFVLLMEIVGPKKREMVAILYQIPFNIGHASLALF---AYFIREWRWFQFSITIFSIVFVI 237
            ......|.::|.: |:|..| .|...|.::   .:|.||   |:..::||.....|...||...:
 Worm   207 VTVVQMVFMVENI-PRKDRM-WIQNSITWS---PNLILFPFVAWLCQDWRTMSVVIAASSIATFL 266

  Fly   238 YIWLVPESPRWLFTTGKLDKSIKILEKIAKCNKAPTETIRPE------IEAAYGALAARQPVKKG 296
            ...::.||||||...|:::::.|.|.:|.|.:|...||...:      :||...|.:::: .||.
 Worm   267 ACLILEESPRWLIQKGRIEEARKSLIRIRKTDKLYDETFEKQLDEVLHVEAEKHARSSKK-AKKY 330

  Fly   297 TVVDLFRTPYMRIKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAG----VGIPGTCLC 357
            |.:.||.|..|..:::...........:.|.....:..|.|:::.:.||...    :.| ...:.
 Worm   331 TFIHLFCTWKMIAQSLTFITGITCTTFIVYSLMYNMEKLSGSLYWNLAIMGASRWIINI-AVSIA 394

  Fly   358 ALMTKYLGRKKTLLLSNGCSALGLILLAC---LSTQAEAVRV-TCATIGLFGASITFPNVYLYGG 418
            .....:.|||....::..|:...|:::|.   .....:.:.: |.|.:.:  .|..|...|:...
 Worm   395 DYKLPWFGRKMINQIAMICTLFALLMIAVYLYFGYNGQLIAIGTVAAVSM--CSQLFIAKYMMVN 457

  Fly   419 ELFPTVVRSSGVGLCSMVGRIGSIVAPLIVDLAAYGLWVA-PLIFG--IFSILAMLGTIFLPETR 480
            ||:||.||:..|...|.:.||||:.:|.:..|:.|..|:. .::|.  ::..:.:  ::|||||:
 Worm   458 ELYPTAVRNLAVSAVSTMSRIGSMFSPQLFYLSDYAEWIPYAVLFSCQLYDFIVL--SLFLPETK 520

  Fly   481 GTPLPETL--EDGETFGRK 497
            |..|...|  :....||::
 Worm   521 GVILENHLPPKHKRIFGKR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 105/421 (25%)
MFS 87..477 CDD:119392 98/409 (24%)
str-176NP_001294210.1 2A0119 13..527 CDD:273328 123/525 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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