DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and Sv2a

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_476558.2 Gene:Sv2a / 117559 RGDID:619715 Length:742 Species:Rattus norvegicus


Alignment Length:562 Identity:117/562 - (20%)
Similarity:178/562 - (31%) Gaps:197/562 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 CESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFR 166
            |.|.....:...||.||::.|:.|:|..|||.|||...|....:..:..........|..:...|
  Rat   198 CLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCR 262

  Fly   167 FLVAVATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIGHA 209
            .|..|...|::...|....|.:..:||.          |:..:|.       ||     |.:|. 
  Rat   263 LLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGS- 326

  Fly   210 SLALFAYFIREWRWFQFSITIFSIVFVI-YIWLVPESPRWLFTTGKLDKSIKILEKIAKCN---K 270
                 ||....||.|.. :..|..||.| .:...|||||:....||.|::..:|:::...|   |
  Rat   327 -----AYQFHSWRVFVL-VCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAK 385

  Fly   271 APTE---------TIRP-----EIEAAYGALAARQPVKK--------GTVVDLFRTPYMRIKTIF 313
            ...|         ||..     ||::..|....|..|:.        |..:..|...|.|| |:.
  Rat   386 GHPERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFSPEYRRI-TLM 449

  Fly   314 MANNWLVVCMVYYGTA-------QYVSAL-----------------------------GG----- 337
            |...|..:...|||..       :::.|:                             ||     
  Rat   450 MMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFND 514

  Fly   338 ----------------------------NIFISNAI----------------------------- 345
                                        |.|..|..                             
  Rat   515 KFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHN 579

  Fly   346 -------AAGVG-----------------IPGTCLCALMTKYLGRKKTLLLSNGCSALGLILLAC 386
                   ..|.|                 :||..:.||:...:||.:.|..|:..|.:....|:.
  Rat   580 KEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVLSCVSCFFLSF 644

  Fly   387 LSTQAEAVRVTCATIGLF-GASITFPNVY-LYGGELFPTVVRSSGVG----LCSMVGRIGSIVAP 445
            .::::..:.:.|    || |.||...|.. :...||:|:..|::..|    ||.:...:|..:..
  Rat   645 GNSESAMIALLC----LFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFT 705

  Fly   446 LIVDLAAYGLWVAPLIFGIFSILAMLGT---IFLPETRGTPL 484
            ..|.:..    .||::|.  |....||:   :.||||||..|
  Rat   706 SFVGITK----AAPILFA--SAALALGSSLALKLPETRGQVL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 117/562 (21%)
MFS 87..477 CDD:119392 110/553 (20%)
Sv2aNP_476558.2 synapt_SV2 1..742 CDD:130366 117/562 (21%)
Interaction with SYT1 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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