DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and Sv2a

DIOPT Version :10

Sequence 1:NP_611451.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_476558.2 Gene:Sv2a / 117559 RGDID:619715 Length:742 Species:Rattus norvegicus


Alignment Length:562 Identity:117/562 - (20%)
Similarity:178/562 - (31%) Gaps:197/562 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 CESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFR 166
            |.|.....:...||.||::.|:.|:|..|||.|||...|....:..:..........|..:...|
  Rat   198 CLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCR 262

  Fly   167 FLVAVATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIGHA 209
            .|..|...|::...|....|.:..:||.          |:..:|.       ||     |.:|. 
  Rat   263 LLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGS- 326

  Fly   210 SLALFAYFIREWRWFQFSITIFSIVFVI-YIWLVPESPRWLFTTGKLDKSIKILEKIAKCN---K 270
                 ||....||.|.. :..|..||.| .:...|||||:....||.|::..:|:::...|   |
  Rat   327 -----AYQFHSWRVFVL-VCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAK 385

  Fly   271 APTE---------TIRP-----EIEAAYGALAARQPVKK--------GTVVDLFRTPYMRIKTIF 313
            ...|         ||..     ||::..|....|..|:.        |..:..|...|.|| |:.
  Rat   386 GHPERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFSPEYRRI-TLM 449

  Fly   314 MANNWLVVCMVYYGTA-------QYVSAL-----------------------------GG----- 337
            |...|..:...|||..       :::.|:                             ||     
  Rat   450 MMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFND 514

  Fly   338 ----------------------------NIFISNAI----------------------------- 345
                                        |.|..|..                             
  Rat   515 KFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHN 579

  Fly   346 -------AAGVG-----------------IPGTCLCALMTKYLGRKKTLLLSNGCSALGLILLAC 386
                   ..|.|                 :||..:.||:...:||.:.|..|:..|.:....|:.
  Rat   580 KEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVLSCVSCFFLSF 644

  Fly   387 LSTQAEAVRVTCATIGLF-GASITFPNVY-LYGGELFPTVVRSSGVG----LCSMVGRIGSIVAP 445
            .::::..:.:.|    || |.||...|.. :...||:|:..|::..|    ||.:...:|..:..
  Rat   645 GNSESAMIALLC----LFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFT 705

  Fly   446 LIVDLAAYGLWVAPLIFGIFSILAMLGT---IFLPETRGTPL 484
            ..|.:..    .||::|.  |....||:   :.||||||..|
  Rat   706 SFVGITK----AAPILFA--SAALALGSSLALKLPETRGQVL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_611451.1 MFS_SLC22 82..477 CDD:340875 110/553 (20%)
Sv2aNP_476558.2 synapt_SV2 1..742 CDD:130366 117/562 (21%)
Interaction with SYT1 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.

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