DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and Sv2b

DIOPT Version :10

Sequence 1:NP_611451.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_476555.1 Gene:Sv2b / 117556 RGDID:619716 Length:683 Species:Rattus norvegicus


Alignment Length:659 Identity:128/659 - (19%)
Similarity:223/659 - (33%) Gaps:240/659 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADRPQDPKAPKPLKPVTKTGDPIISQIGDFRRYQLFFFFIVLLCKFGTGWHTLGHIFLAAPTPL 65
            ||:|.:|.      :.:....:.||.:.| ..|:|...||:::|.....|    ..:|:.:....
  Rat    81 MAERMEDE------EQLAHQYETIIDECG-HGRFQWTLFFVLVLALMADG----VEVFVVSFALP 134

  Fly    66 SCKTENVTDPCSDECSETEFDTSVFQSTIITEWNLTCESKQLASLSQSIVMLGILFGSILFGMFA 130
            |.:        .|.|                   |:...|.:..|   ||.||::.|:.:.|..|
  Rat   135 SAE--------KDMC-------------------LSSSKKGMLGL---IVYLGMMAGAFILGGLA 169

  Fly   131 DRYGRRPAFLTCCFMQL-ITGLIVCVSPY---YWFYCLFRFLVAVATAGTMTTSFVLLMEIVGPK 191
            |:.||:...    .|.| |......:|.:   |..:...|.:..:...|::...|....|.:..:
  Rat   170 DKLGRKKVL----SMSLAINASFASLSSFVQGYGAFLFCRLISGIGIGGSLPIVFAYFSEFLSRE 230

  Fly   192 KRE----------MVAILYQ-------IP-----FNIGHASLALFAYFIREWRWFQFSITIFSIV 234
            ||.          |...:|.       ||     |::|      ..|....||.|.....:.:.|
  Rat   231 KRGEHLSWLGIFWMTGGIYASAMAWSIIPHYGWGFSMG------TNYHFHSWRVFVIVCALPATV 289

  Fly   235 FVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCN---KAPTETI-------RP-------EIEA 282
            .::.:..:|||||:|...||.|::..||:::...|   |...|.:       .|       ||::
  Rat   290 SMVALKFMPESPRFLLEMGKHDEAWMILKQVHDTNMRAKGTPEKVFTVSHIKTPKQMDEFIEIQS 354

  Fly   283 AYGALAARQPVKKGTVVDLFRT-----------PYMRIKTIFMANNWLVVCMVYYGTA------- 329
            :.|....|..|:..|:   |:.           || |:.|:.:|..|..:.:.|||..       
  Rat   355 STGTWYQRWLVRFMTI---FKQVWDNALYCVMGPY-RMNTLILAVVWFTMALSYYGLTVWFPDMI 415

  Fly   330 ------QYVSAL---------GGNI---------------------------------------- 339
                  :|.|.:         |..|                                        
  Rat   416 RYFQDEEYKSKMKVFFGEHVHGATINFTMENQIHQHGKLVNDKFIKMYFKHVLFEDTFFDKCYFE 480

  Fly   340 ---------------------------------FISNA---------------------IAAGVG 350
                                             ||::.                     :.:.:|
  Rat   481 DVTSTDTYFKNCTIESTTFYNTDLYKHKFIDCRFINSTFLEQKEGCHMDFEEDNDFLIYLVSFLG 545

  Fly   351 ----IPGTCLCALMTKYLGRKKTLLLSNGCSALGLILLACLSTQAEAVRVTCATIGLF-GASITF 410
                :||..:.||:...:||.|.:..|...||:....|...::::..:...|    || |.||..
  Rat   546 SLSVLPGNIISALLMDRIGRLKMIGGSMLISAVCCFFLFFGNSESAMIGWQC----LFCGTSIAA 606

  Fly   411 PNVY-LYGGELFPTVVRSSGVGLCSMVGRIGSIVAPLIVDLAAY-GLW-VAPLIFGIFSIL-AML 471
            .|.. :...||:||..|::..|:.:.:.::|:|:...|  .|:: |:. |.|::....|:: ..|
  Rat   607 WNALDVITVELYPTNQRATAFGILNGLCKLGAILGNTI--FASFVGITKVVPILLAAASLVGGGL 669

  Fly   472 GTIFLPETR 480
            ..:.|||||
  Rat   670 VALRLPETR 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_611451.1 MFS_SLC22 82..477 CDD:340875 106/573 (18%)
Sv2bNP_476555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72
synapt_SV2 8..683 CDD:130366 128/659 (19%)
Blue background indicates that the domain is not in the aligned region.

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