DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and sv2b

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_002933355.1 Gene:sv2b / 100497731 XenbaseID:XB-GENE-6041859 Length:711 Species:Xenopus tropicalis


Alignment Length:618 Identity:129/618 - (20%)
Similarity:207/618 - (33%) Gaps:232/618 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LSCKTENVTDPCSDECSETEFDTSVF-----------QSTIITEWNLTCESKQLASLSQS----- 113
            |:.:.||:.    .||....|..::|           ....:..:.|....|.:. ||:|     
 Frog   119 LAYQYENII----QECGHGRFQWTLFVVLGLALMADGVEVFVVGFVLPSAEKDMC-LSRSNKGML 178

  Fly   114 --IVMLGILFGSILFGMFADRYGRRPAFLTCCFMQL-ITGLIVCVSPYYWFYCLF---RFLVAVA 172
              ||.||::.|:.::|..||:.||:    .|..:.| |......||.:...|.||   |.:....
 Frog   179 GLIVYLGMMLGAFVWGGLADKVGRK----KCLIISLTINAAFSFVSSFVQGYGLFLFCRLISGFG 239

  Fly   173 TAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIG-HASLALF 214
            ..|::...|....|.:..:||.          |:..:|.       ||     |::| |      
 Frog   240 IGGSLPIVFAYFSEFLAREKRGEHLSWLCMFWMIGAVYAAAMAWSIIPHYGWGFSMGTH------ 298

  Fly   215 AYFIREWRWFQFSITIFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCN---------- 269
             |....||.|.....:..|..:|.:..:|||||:|..|||.|::..||:.|...|          
 Frog   299 -YHFHSWRVFVVICVLPCIASIIALKFMPESPRFLLETGKHDEAWMILKNIHDTNMRAKGEPEKV 362

  Fly   270 ---------KAPTETIRPEIEAAYGALAARQPVKKGTVV--------DLFRTPYMRIKTIFMANN 317
                     |.|.|.|  ||:::.|....|..|:..||:        ..|...: |..|||:|..
 Frog   363 FTVSHIKTPKQPDEFI--EIQSSTGTWFQRWFVRIMTVIKQIWENMLHCFSGQF-RKNTIFLAVV 424

  Fly   318 WLVVCMVYYG-------TAQY-------------------------------------------- 331
            |..:.:.|||       |.:|                                            
 Frog   425 WFTMSLSYYGLTVWFPDTIRYLQDEDYASKVKRFTDENVKNFNFNFTLENQIHEDGEYYNDRFYK 489

  Fly   332 --------------------VSALGG---NIFISNAI---------------------------- 345
                                |::.|.   |..|.|.:                            
 Frog   490 MKLKYVTFKDSLFDECYFEDVTSTGSIFENCTIQNTVFYNTDLYQHKFIDCNFINVTFSQPKEGC 554

  Fly   346 --------------AAGVG----IPGTCLCALMTKYLGRKKTLLLSNGCSALGLILLACLSTQAE 392
                          .:.:|    :||..:.||:...:||.:.:..|...||:....|...::::.
 Frog   555 HIDFEEDNDFLIYLVSFLGSLSVLPGNIISALLMDKIGRIRMIAGSMLISAVCCFFLFFGNSESA 619

  Fly   393 AVRVTCATIGLF-GASITFPNVY-LYGGELFPTVVRSS--GV--GLCSMVGRIGSIVAPLIVDLA 451
            .:...|    || |.||...|.. :...||:||..|::  |:  |||.:....|:.:....|.:.
 Frog   620 MIGWQC----LFCGTSIAAWNALDVVTVELYPTNKRATAFGILNGLCKLAAIFGNSIFASFVGIT 680

  Fly   452 AYGLWVAPLIFGIFSILAMLG----TIFLPETR 480
            .    |.|:   :.:..|::|    ::.|||||
 Frog   681 K----VIPI---LLASTALVGGGLISLRLPETR 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 124/598 (21%)
MFS 87..477 CDD:119392 118/591 (20%)
sv2bXP_002933355.1 synapt_SV2 1..711 CDD:130366 129/618 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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