DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and slc22a2

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_002933908.1 Gene:slc22a2 / 100487774 XenbaseID:XB-GENE-965056 Length:544 Species:Xenopus tropicalis


Alignment Length:542 Identity:151/542 - (27%)
Similarity:246/542 - (45%) Gaps:78/542 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TGDPIISQIGDFRRYQLFFFFIVLLCKFGTGWHTL--GHIFLAAPTPLSCKTENVTDPCSDECSE 82
            |.|.::..||:|..:|...|  :|||.....:..:  |.:||.......|.:..:.:| |:||..
 Frog     3 TFDELLEHIGEFDAFQKQIF--ILLCFISVVFSPIYVGIVFLGFVPDYRCVSAGIPEP-SNECEW 64

  Fly    83 T--------------------------------------------------EFDTSVFQSTIITE 97
            |                                                  .:|.:...|:::||
 Frog    65 TLNYTGPNGSTDSLYMSQCYQYDVDWNSTSLNCTNSSLNITSKLPITNCKDGWDYNTTGSSLVTE 129

  Fly    98 WNLTCESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFY 162
            :||.|.........||.|.:|...|.::.|..|||:||:|..::...:..|.|:::..:|.|...
 Frog   130 FNLVCGDSWKLDFFQSCVNIGFFIGGLISGYIADRFGRKPFLISSILITGIFGILMAFAPNYPLV 194

  Fly   163 CLFRFLVAVATAGTMTTSFVLLMEIVGPKKREMVAILYQIPFNIGHASLALFAYFIREWRWFQFS 227
            ..|||:....:.|...:.::|:.|.||.:.|..|.|:||..|.:|...|:..||.:..|||.|.:
 Frog   195 VTFRFIQGFVSKGCWLSGYILVAEFVGLEHRRTVGIVYQAAFTVGLLLLSGVAYVLPHWRWLQMT 259

  Fly   228 ITIFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCNKAPTETIRPEIEAAYGALAARQP 292
            :||....|:.|.|.||||||||.:..:..::..|:..|||.|..........:.|...|...:.|
 Frog   260 VTIPYFFFLAYYWCVPESPRWLISQNRKAEAKAIIHTIAKKNGKMVPDFLESLTADEEAGEKQVP 324

  Fly   293 VKKGTVVDLFRTPYMRIKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAGVGIPGTCLC 357
                :.:||.|||.:|..|:.:...|....:||.|:..::.:...||:....|:|.|..|...|.
 Frog   325 ----SFLDLVRTPQIRKHTLILMYIWFTCAVVYQGSIMHMGSTAENIYFDFFISALVEFPSAILI 385

  Fly   358 ALMTKYLGRKKTLLLSNGCSALGLILLACLSTQ-----AEAVRVTCATIGLFGASITFPNVYLYG 417
            .:....:||:...|:.  |...|   :.||.|.     ...:.:|.:.:...|.::::..|.|..
 Frog   386 IVTVDRVGRRYPWLVC--CIITG---ITCLITAFIPHGYSWLIITLSCVSRMGITVSYEMVCLVN 445

  Fly   418 GELFPTVVRSSGVGLCSMVGRIGSIVAPLIV-DLAAYGLW-VAPLIFGIFSILAMLGTI---FLP 477
            .||:||.:|:.|:.:||.:..:|.::.|.|| .|||  :| ..|||  :|::||.:..|   |||
 Frog   446 AELYPTFIRNLGIMVCSSMCDLGGVITPFIVYRLAA--IWQELPLI--VFAVLATVSGILVYFLP 506

  Fly   478 ETRGTPLPETLEDGETFGRKKK 499
            ||:|..||||:|:.|...::.|
 Frog   507 ETKGRALPETIEEAENLHKQVK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 127/411 (31%)
MFS 87..477 CDD:119392 119/399 (30%)
slc22a2XP_002933908.1 2A0119 12..516 CDD:273328 143/519 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.