DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and sv2a

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_012825002.1 Gene:sv2a / 100379721 XenbaseID:XB-GENE-968429 Length:729 Species:Xenopus tropicalis


Alignment Length:563 Identity:115/563 - (20%)
Similarity:178/563 - (31%) Gaps:199/563 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 CESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFR 166
            |.|.....:...||.||::.|:.|:|..|||.|||...|....:..:..........|..:...|
 Frog   185 CLSDSNKGMLGLIVYLGMMVGAFLWGGMADRIGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCR 249

  Fly   167 FLVAVATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIGHA 209
            .|..|...|::...|....|.:..:||.          |:..:|.       ||     |.:|. 
 Frog   250 LLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFQMGS- 313

  Fly   210 SLALFAYFIREWRWFQFSITIFSIVFVI-YIWLVPESPRWLFTTGKLDKSIKILEKIAKCNK--- 270
                 ||....||.|.. :..|..||.| .:..:|||||:....||.|::..:|:::...|.   
 Frog   314 -----AYQFHSWRVFVL-VCAFPSVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAK 372

  Fly   271 ---------APTETIRP-----EIEAAYGALAARQPVKKGTVVDL-----------FRTPYMRIK 310
                     ...:||:.     ||::..|||..|..:|   :::|           |...|.|| 
 Frog   373 GHPERVFSVTQIKTIKQDDELVEIQSDTGALHRRWMIK---LLNLSQEVWANFHQCFAPEYRRI- 433

  Fly   311 TIFMANNWLVVCMVYYG-------------TAQYVS----------------------------- 333
            |:.|...|..:...|||             ...|.|                             
 Frog   434 TLMMMAVWFTMSFSYYGLTVWFPDMIKHLQNIDYASRTKYFHNESVNNFNFNFTLENQVHRKGEY 498

  Fly   334 ---------------------------ALGGNIFISNA--------------------------- 344
                                       ....|.|..|.                           
 Frog   499 HNDKFIGLKLKSVIFEDSLFTDCYFEDITSSNTFFKNCSFIRTMFYNTDLFDYKFINSKFTNSTF 563

  Fly   345 ----------------------IAAGVG----IPGTCLCALMTKYLGRKKTLLLSNGCSALGLIL 383
                                  ..:.:|    :||..:.||:...:||.:.|..|:..|.:....
 Frog   564 LHSKEGCQLDFSDDINNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCISCFF 628

  Fly   384 LACLSTQAEAVRVTCATIGLF-GASITFPNVY-LYGGELFPTVVRSSGVG----LCSMVGRIGSI 442
            |...::::..:.:.|    || |.||...|.. :...||:|:..|::..|    ||.:...:|..
 Frog   629 LFFGNSESAMIALLC----LFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGIS 689

  Fly   443 VAPLIVDLA-AYGLWVAPLIFGIFSILAMLGTIFLPETRGTPL 484
            :....|.:| |..:.:|.....:.|.||:.    ||||||..|
 Frog   690 IFTSFVGVAKAVPILLASAALAVGSFLALK----LPETRGQVL 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 115/563 (20%)
MFS 87..477 CDD:119392 108/554 (19%)
sv2aXP_012825002.1 synapt_SV2 1..729 CDD:130366 115/563 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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