DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and sv2a

DIOPT Version :10

Sequence 1:NP_611451.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_012825002.1 Gene:sv2a / 100379721 XenbaseID:XB-GENE-968429 Length:729 Species:Xenopus tropicalis


Alignment Length:563 Identity:115/563 - (20%)
Similarity:178/563 - (31%) Gaps:199/563 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 CESKQLASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFR 166
            |.|.....:...||.||::.|:.|:|..|||.|||...|....:..:..........|..:...|
 Frog   185 CLSDSNKGMLGLIVYLGMMVGAFLWGGMADRIGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCR 249

  Fly   167 FLVAVATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIGHA 209
            .|..|...|::...|....|.:..:||.          |:..:|.       ||     |.:|. 
 Frog   250 LLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFQMGS- 313

  Fly   210 SLALFAYFIREWRWFQFSITIFSIVFVI-YIWLVPESPRWLFTTGKLDKSIKILEKIAKCNK--- 270
                 ||....||.|.. :..|..||.| .:..:|||||:....||.|::..:|:::...|.   
 Frog   314 -----AYQFHSWRVFVL-VCAFPSVFAIGALTTMPESPRFFLENGKHDEAWMVLKQVHDTNMRAK 372

  Fly   271 ---------APTETIRP-----EIEAAYGALAARQPVKKGTVVDL-----------FRTPYMRIK 310
                     ...:||:.     ||::..|||..|..:|   :::|           |...|.|| 
 Frog   373 GHPERVFSVTQIKTIKQDDELVEIQSDTGALHRRWMIK---LLNLSQEVWANFHQCFAPEYRRI- 433

  Fly   311 TIFMANNWLVVCMVYYG-------------TAQYVS----------------------------- 333
            |:.|...|..:...|||             ...|.|                             
 Frog   434 TLMMMAVWFTMSFSYYGLTVWFPDMIKHLQNIDYASRTKYFHNESVNNFNFNFTLENQVHRKGEY 498

  Fly   334 ---------------------------ALGGNIFISNA--------------------------- 344
                                       ....|.|..|.                           
 Frog   499 HNDKFIGLKLKSVIFEDSLFTDCYFEDITSSNTFFKNCSFIRTMFYNTDLFDYKFINSKFTNSTF 563

  Fly   345 ----------------------IAAGVG----IPGTCLCALMTKYLGRKKTLLLSNGCSALGLIL 383
                                  ..:.:|    :||..:.||:...:||.:.|..|:..|.:....
 Frog   564 LHSKEGCQLDFSDDINNAYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCISCFF 628

  Fly   384 LACLSTQAEAVRVTCATIGLF-GASITFPNVY-LYGGELFPTVVRSSGVG----LCSMVGRIGSI 442
            |...::::..:.:.|    || |.||...|.. :...||:|:..|::..|    ||.:...:|..
 Frog   629 LFFGNSESAMIALLC----LFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGIS 689

  Fly   443 VAPLIVDLA-AYGLWVAPLIFGIFSILAMLGTIFLPETRGTPL 484
            :....|.:| |..:.:|.....:.|.||:.    ||||||..|
 Frog   690 IFTSFVGVAKAVPILLASAALAVGSFLALK----LPETRGQVL 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_611451.1 MFS_SLC22 82..477 CDD:340875 108/554 (19%)
sv2aXP_012825002.1 synapt_SV2 1..729 CDD:130366 115/563 (20%)

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