DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8654 and sv2ba

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001076464.1 Gene:sv2ba / 100009626 ZFINID:ZDB-GENE-070209-134 Length:689 Species:Danio rerio


Alignment Length:621 Identity:117/621 - (18%)
Similarity:199/621 - (32%) Gaps:227/621 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LSCKTENVTDP-----CSDECSETEFDTSVFQ-----------STIITEWNLTCESKQLASLSQS 113
            ::.:.|..|.|     ..::|....|..::|.           ...:..:.|....|.:. ||.:
Zfish    86 MAAEVEEETLPDQYESIMEDCGHGRFQWTLFTLLGLALMADGVECFVVSFALPSAEKDMC-LSNA 149

  Fly   114 -------IVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFRFLVAV 171
                   ||.:|::.|::::|..||:.||:...|....:..|...:.|.:..|.|:..||....:
Zfish   150 DKGMLGLIVYVGMMIGAVVWGGLADKLGRKQCLLYALAINCIFSFLSCFAQGYGFFIFFRLCSGI 214

  Fly   172 ATAGTMTTSFVLLMEIVGPKKRE----------MVAILYQ-------IP-----FNIGHASLALF 214
            ...|::...:....|.:...||.          |:..||.       ||     |::|      .
Zfish   215 GIGGSIPVVYTYYAEFLQMDKRGEHLSWLCLFWMLGGLYASFTAWGIIPHYGWGFSMG------T 273

  Fly   215 AYFIREWRWFQFSITIFSIVFVIYIWLVPESPRWLFTTGKLDKSIKILEKIAKCN---KAPTETI 276
            .:....||.|.....:.|:..:..:..:|||||:|..:.:.|::..||.::...|   |...|.:
Zfish   274 EFQFHSWRVFVLVCFLPSVAALAGLVFMPESPRFLLESARHDEAWMILRRVHDTNWGAKGEPERV 338

  Fly   277 -------RP--------EIEAAYGALAARQPVKKGTVVD-------LFRTPYMRIKTIFMANNWL 319
                   .|        ||::..|....|..|::.|:|.       ....|.:|:..:|:|..|.
Zfish   339 FQVSQIKTPQTQDDEFIEIQSETGTAFQRFMVRQMTLVKQVMKNMLSLAAPDVRLHGLFIAIVWF 403

  Fly   320 VVCMVYYG--------------------------------------------TAQYVSALGGNIF 340
            .:...|||                                            ..:||.....||.
Zfish   404 TMAFSYYGLGTWFPDQIKYLQFEEYESNVKIFHRERVERFHFNFTLQNQLHKEGEYVHDRFINIE 468

  Fly   341 ISNA------------------------------------------------------------- 344
            |.|.                                                             
Zfish   469 IRNVKFEDSLFENCYFEDIKSTETFFENCTLKNTVFYNTDLWEDSKFINCNLENTTFLHPKKGCH 533

  Fly   345 ------------IAAGVG----IPGTCLCALMTKYLGRKKTLLLSNGCSALG-----LILLACLS 388
                        :.:.:|    |||..|..|:...:||.|.:    |.|.||     ..||.|.|
Zfish   534 LNFQEENDILIYLDSFLGSLSVIPGNILAGLLMDKIGRLKII----GGSMLGSAVCTFFLLLCFS 594

  Fly   389 TQAEAVRVTCATIGLFGA--SITFPNVYLYGGELFPTVVRSSGVGLCSMVGRIGSIVAPLIVDLA 451
             |...|...|    ||.|  :..:..:.:...||:|...|::..|:.:...::.:|::..|    
Zfish   595 -QWAVVLFQC----LFFAAGAAAWNGIEVVTVELYPASKRATAFGVLNGTCKLAAIISSFI---- 650

  Fly   452 AYGLWVA-----PLIFGIFSILAMLGTIF--LPETR 480
             :|.::.     |:|.. ||.|...|.:.  |||||
Zfish   651 -FGKFIGITKIIPIILS-FSALVCGGLLAFKLPETR 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 113/596 (19%)
MFS 87..477 CDD:119392 107/589 (18%)
sv2baNP_001076464.1 synapt_SV2 36..689 CDD:130366 117/621 (19%)
MFS 116..678 CDD:119392 107/583 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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