DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8654 and slc22a13a

DIOPT Version :9

Sequence 1:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_021322911.1 Gene:slc22a13a / 100007819 ZFINID:ZDB-GENE-070912-473 Length:537 Species:Danio rerio


Alignment Length:525 Identity:145/525 - (27%)
Similarity:244/525 - (46%) Gaps:63/525 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IISQIGDFRRYQLFFFFIVLLCKFGTGWHTLGHIFLAAPTPLSCKTE---------------NVT 73
            |:..||||..:|....|.:........:.....:|..|.|...|.|:               |:|
Zfish     7 ILEAIGDFGLFQKLLLFALCFPNLILPFQLSSLVFNHADTNHHCNTDWILKADPNLTKEEQLNLT 71

  Fly    74 ---------DPC--------------------SDECSE--TEFDTSVFQSTIITEWNLTCESKQL 107
                     :||                    :..|::  ...|| ::::||:|:::|.||:..:
Zfish    72 LPRLSDGSFNPCQMYKPVDWNLSAIQEYGLNQTTTCTDGWVHNDT-IYEATIVTDFDLVCENVNI 135

  Fly   108 ASLSQSIVMLGILFGSILFGMFADRYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFRFLVAVA 172
            ...:|::...|:|.|:||||.|::.:||:.|......:.||..::..:||.::.|.:.:|:..|.
Zfish   136 FRGAQTVFFAGVLVGAILFGPFSESFGRKRATQIPMVLMLIFTVVTGLSPNFYVYLVSQFINGVG 200

  Fly   173 TAGTMTTSFVLLMEIVGPKKREMVAILYQIPFNIGHASLALFAYFIREWRWFQFSITIFSIVFVI 237
            ..|....|.:|..|.:|..:|...|.|.|:...:|........||:|:||..||.:.....:.||
Zfish   201 LGGFRINSIILASEWIGVAQRSYAACLSQVLAALGQVMFLAVVYFVRDWRLDQFIMAGPIGIVVI 265

  Fly   238 YIWLVPESPRWLFTTGKLDKSIKILEKIAKCNK-APTETIRPEIEAAYGALAARQPVKKGTVVDL 301
            |||.:|||.|||...|:...:.|:::|.|..|| |..|::..|:       ...:||:||.:..|
Zfish   266 YIWFLPESARWLLDRGRTKDAKKLIQKAAAVNKRAVPESLVEEV-------LKEKPVEKGGIKIL 323

  Fly   302 FRTPYMRIKTIFMANNWLVVCMVYYGTAQYVSALGGNIFISNAIAAGVGIPGTCLCALMTKYLGR 366
            |.:..:|...:.:...|..:.:.||..:..|...|.:||::..|.....||...||....:.:||
Zfish   324 FGSRVLRKYFLAITFAWCALNLAYYSLSLNVGKFGLDIFLTQLIFGLSEIPVHFLCMWSLEVVGR 388

  Fly   367 KKTLLLS---NGCSALGLILLACLSTQAEAVRVTCATIGLFGASITFPNVYLYGGELFPTVVRSS 428
            |.:|::|   .||..|..:.:...|:.|.||..||... |..|:.:..|||..  |||||.:|.:
Zfish   389 KPSLIVSLVLGGCLCLLTVAVPQNSSIAIAVLATCGRF-LMNAAGSVCNVYFQ--ELFPTSIRQT 450

  Fly   429 GVGLCSMVGRIGSIVAPLIVDLAAYGLWVAPLIFGIFSILAMLGTIFLPETRGTPLPETLEDGET 493
            ..||.|...|.||:::|::..|..:...:..::....::.:.:....|||||.|.||.:.|:.| 
Zfish   451 ATGLGSTAARAGSMLSPVVNMLEIFHFSIPMVVISSLALASGVTAFLLPETRRTELPASTEEAE- 514

  Fly   494 FGRKK 498
             |::|
Zfish   515 -GKRK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8654NP_001246441.1 SP 85..487 CDD:273317 124/405 (31%)
MFS 87..477 CDD:119392 115/393 (29%)
slc22a13aXP_021322911.1 Sugar_tr 12..507 CDD:331684 137/505 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.