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Protein Alignment Toll-7 and Lingo1

DIOPT Version :9

Sequence 1:	NP_523797.1	Gene:	Toll-7 / 37272	FlyBaseID:	FBgn0034476	Length:	1446	Species:	Drosophila melanogaster
Sequence 2:	NP_001094192.1	Gene:	Lingo1 / 315691	RGDID:	1308668	Length:	620	Species:	Rattus norvegicus

Alignment Length:	347	Identity:	95/347 - (27%)
Similarity:	158/347 - (45%)	Gaps:	41/347 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   247 SELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETL 311
            :|.::||...|.::::::. ..:....|:.|.|..|.:|.:...|...|.:||.:.|.:|.|:.:
  Rat    71 TETRLLDLGKNRIKTLNQD-EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLI 134

  Fly   312 PEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLN 376
            |.|:|.|...|.::.:.:|::..|...:|..|..|..:::..|.|.  ::.:..|:||..|..|.
  Rat   135 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV--YISHRAFSGLNSLEQLT 197

  Fly   377 LAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLH--TLDDKLFN 439
            |....||.|.......|:.|.:|.||:.:|..|.|.:|..||.|..|.::    |  .||....|
  Rat   198 LEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS----HWPYLDTMTPN 258

  Fly   440 GLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVP-RALQDLAMLRTLDLGENQIRT 503
            .||.|                      :|..|.::...|..|| .|::.|..||.|:|..|.|.|
  Rat   259 CLYGL----------------------NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGT 301

  Fly   504 FDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRL 568
            .:......|.:|..::|:..|:..:....|:.|..|.|||::.|::.::|..:|.....||.:.|
  Rat   302 IEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLIL 366

  Fly   569 DRNFLA-DINGVFATLVSLLWL 589
            |.|.|| |..        |||:
  Rat   367 DSNPLACDCR--------LLWV 380

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.