DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-7 and Lingo3

DIOPT Version :9

Sequence 1:NP_523797.1 Gene:Toll-7 / 37272 FlyBaseID:FBgn0034476 Length:1446 Species:Drosophila melanogaster
Sequence 2:NP_001013780.2 Gene:Lingo3 / 237403 MGIID:3609246 Length:589 Species:Mus musculus


Alignment Length:612 Identity:139/612 - (22%)
Similarity:232/612 - (37%) Gaps:164/612 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 SELQVLDASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETL 311
            :|.::|:.|.|.:|.::.. .::.|..|:.|:|.:|.::.:...|.|.|..||::.|..|.|:.:
Mouse    53 AETRMLELSRNRIRCLNPG-DLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLI 116

  Fly   312 PEGLFAGSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLIVLN 376
            |.|:|.....|..:.|.:|:|..|....|..|..|..:::..|.|.  .:....||||:.|..|.
Mouse   117 PPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLV--FISRRAFAGLLGLAELT 179

  Fly   377 LAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNL---------AENRLHT 432
            |....||.:...:...|..|..|.||:.:|..:||..|..|..|..|.:         |...|..
Mouse   180 LERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRG 244

  Fly   433 LDDKLFNGLYVLSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPR-ALQDLAMLRTLDL 496
            |:         |:.|::.:..|:.|..|..:..:.|..|:||.|.::.||| :.:||..||.|.|
Mouse   245 LN---------LTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHL 300

  Fly   497 GENQIRTFDNQSFKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNF 561
            ....:...:.|:|..|.|                        :.:|||:.|.:.::|..:|....
Mouse   301 AGALLAVIEPQAFVGLRQ------------------------IRLLNLSDNLLSTLEENTFHSVN 341

  Fly   562 ELEAIRLDRNFLA-DINGVFATLVSLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYY 625
            .||.:|:|.|.|| |..        |||: :.....:.|| ..:|:.....::.|          
Mouse   342 TLETLRVDGNPLACDCR--------LLWI-VQRRKTLNFD-GRLPACATPAEVRG---------- 386

  Fly   626 KLQEEIRVKTLDASHNRITEIGPMSIPNTIELLFINNNLIGNVQPNAFVDKANLARVDLYANQLS 690
                       ||.||         :|:::  ||           ..||.:              
Mouse   387 -----------DALHN---------LPDSV--LF-----------EYFVCR-------------- 404

  Fly   691 KLQLQQLRVAPVVAPKPLPEFYLGGNPFECDCTMDWLQRINNLTTRQHPRVMDMANIECVMPHAR 755
            |.::::.|:..|.|.:.....:|.....|...|:.|:       |.||         ..|...:|
Mouse   405 KPKIRERRLQHVTATEGDDVRFLCRAEGEPAPTVAWV-------TPQH---------HSVTAASR 453

  Fly   756 G-AAVRP-----LSGLRPQDFLCRYESHCFALCHCCDFDACDCEMTCPSNCTCYHDQIWST---- 810
            | |.|.|     ::..||||                     ....||.::....:|..::|    
Mouse   454 GRARVLPGGTLTIADTRPQD---------------------SGTYTCVASNAGGNDTYFATLTVQ 497

  Fly   811 ---NVVDCGGQQTTELPRRVPMDSSVV 834
               |.....|...|::..|.|:|.:.:
Mouse   498 PAANRTQGDGHNETQVGVRFPLDLTTI 524

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Toll-7NP_523797.1 LRR_8 135..201 CDD:290566
leucine-rich repeat 136..159 CDD:275380
leucine-rich repeat 160..190 CDD:275380
LRR_8 189..259 CDD:290566 4/11 (36%)
leucine-rich repeat 191..214 CDD:275380