DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-7 and Lrrc3c

DIOPT Version :9

Sequence 1:NP_523797.1 Gene:Toll-7 / 37272 FlyBaseID:FBgn0034476 Length:1446 Species:Drosophila melanogaster
Sequence 2:NP_001182473.1 Gene:Lrrc3c / 192852 MGIID:2684858 Length:255 Species:Mus musculus


Alignment Length:242 Identity:58/242 - (23%)
Similarity:84/242 - (34%) Gaps:89/242 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   802 CYHDQIWSTNVVDCGGQQT--------TELPRRVPMDSSVVYLDGNNFPVLKNHAFIGRKNLRAL 858
            ||        |.:..|:||        :.:|..:|.|:..:|||.|                   
Mouse    31 CY--------VAEEAGEQTFRCSRAGLSAVPNGIPNDTRKLYLDAN------------------- 68

  Fly   859 YVNGSQVAAIQNRTFASLASLQLLHLADNKLRTLHGYEFEQL-SALRELYLQNNQLTTIENATLA 922
                 |:|::....|..|.:|:.|.|:.|.|..|.|..|:.| ..||.|.|..|||.::      
Mouse    69 -----QLASVPAGAFQHLPALEELDLSHNALVHLSGAAFQGLEGTLRHLDLSANQLASV------ 122

  Fly   923 PLAALELIRIDGNRLVTLPIWQMHATHFGTRLKSISLGRNQWSCRCQFLQALTSYVADNALIVQD 987
            |:||...::|                       .::|..|.|.|.|. ||.:..:|.        
Mouse   123 PVAAFVGLQI-----------------------QVNLSANPWRCDCA-LQEVLRHVR-------- 155

  Fly   988 AQDIYCMAASSGT----GSAALEDSSSNSGSLEKRELDFNATGAACT 1030
                  :|..|||    |..|..|...:...|..||.:...||...|
Mouse   156 ------LAPGSGTGIVCGPEARPDLVGHEFLLLTREEELCGTGRGGT 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-7NP_523797.1 LRR_8 135..201 CDD:290566
leucine-rich repeat 136..159 CDD:275380
leucine-rich repeat 160..190 CDD:275380
LRR_8 189..259 CDD:290566
leucine-rich repeat 191..214 CDD:275380
leucine-rich repeat 215..248 CDD:275380
LRR_RI 247..501 CDD:238064
LRR_8 247..308 CDD:290566
leucine-rich repeat 249..273 CDD:275380
leucine-rich repeat 274..297 CDD:275380
LRR_8 297..356 CDD:290566
leucine-rich repeat 298..321 CDD:275380
leucine-rich repeat 322..345 CDD:275380
LRR_8 345..406 CDD:290566
leucine-rich repeat 346..371 CDD:275380
leucine-rich repeat 372..395 CDD:275380
leucine-rich repeat 396..419 CDD:275380
LRR_8 419..478 CDD:290566
leucine-rich repeat 420..443 CDD:275380
leucine-rich repeat 444..467 CDD:275380
LRR_RI 466..622 CDD:238064
leucine-rich repeat 468..488 CDD:275380
LRR_8 491..549 CDD:290566
leucine-rich repeat 491..514 CDD:275380
leucine-rich repeat 515..536 CDD:275380
leucine-rich repeat 539..562 CDD:275380
leucine-rich repeat 563..585 CDD:275380
leucine-rich repeat 586..626 CDD:275380
leucine-rich repeat 627..653 CDD:275380
LRRCT 716..772 CDD:214507
LRRNT 796..830 CDD:214470 8/35 (23%)
leucine-rich repeat 812..829 CDD:275380 5/24 (21%)
leucine-rich repeat 833..854 CDD:275380 4/20 (20%)
LRR_8 853..913 CDD:290566 18/60 (30%)
leucine-rich repeat 855..878 CDD:275380 4/22 (18%)
LRR_4 878..918 CDD:289563 16/40 (40%)
leucine-rich repeat 879..902 CDD:275380 9/23 (39%)
leucine-rich repeat 903..926 CDD:275380 8/22 (36%)
leucine-rich repeat 927..953 CDD:275380 1/25 (4%)
TIR 1098..1235 CDD:214587
Lrrc3cNP_001182473.1 leucine-rich repeat 40..59 CDD:275378 4/18 (22%)
leucine-rich repeat 60..83 CDD:275378 8/46 (17%)
LRR_8 61..119 CDD:290566 22/81 (27%)
LRR_4 61..99 CDD:289563 14/61 (23%)
LRR_4 82..123 CDD:289563 16/46 (35%)
leucine-rich repeat 84..108 CDD:275378 9/23 (39%)
leucine-rich repeat 109..131 CDD:275378 10/27 (37%)
leucine-rich repeat 132..143 CDD:275378 4/33 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.