DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-7 and let-4

DIOPT Version :9

Sequence 1:NP_523797.1 Gene:Toll-7 / 37272 FlyBaseID:FBgn0034476 Length:1446 Species:Drosophila melanogaster
Sequence 2:NP_510425.2 Gene:let-4 / 181554 WormBaseID:WBGene00002282 Length:773 Species:Caenorhabditis elegans


Alignment Length:653 Identity:160/653 - (24%)
Similarity:268/653 - (41%) Gaps:125/653 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LRLDSCKLL---QLPN--NAFEGLATLKSLRLSTHNSEWGPTRTLELFPDSLGGLKQ-------- 190
            :||..|.||   .|.|  ||..|:.|........|:.     ..|:....|..|:.|        
 Worm     1 MRLLLCLLLFSTLLINSTNACPGVITQACFCSEVHSG-----IVLDCSNSSASGILQIIRTNQAQ 60

  Fly   191 ---LTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVL 252
               :..|.:....|.:||..|...: .::.|:|::|:|:..:...||.:|               
 Worm    61 VGLIQSLTMNQAELVELPPNFFSGL-FIRRLDLSQNKIKKIDDAAFAGIN--------------- 109

  Fly   253 DASHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPEGLFA 317
                               ..|:.:.|.:|.:.::...|||||.:|..::||||.:         
 Worm   110 -------------------PVLEEVVLNHNLIEKVPAAALAGLPNLLRLDLSNNSI--------- 146

  Fly   318 GSKELREIHLQQNELYELPKGLFHRLEQLLVVDLSGNQLTSNHVDNTTFAGLIRLI-VLNLAHNA 381
                   :.:|:.|       :|..|.:|..::|..|::.|.|  .:||..:...| .:||.||.
 Worm   147 -------VEIQEQE-------IFPNLNKLYDINLGSNKIFSIH--TSTFQNVKNSIQTINLGHNN 195

  Fly   382 LTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYVLSK 446
            :|.:.....:.|..||.|:|..|.|..::...||.|..|:.||||.|::|.|:.:.|..:..|..
 Worm   196 MTAVPSSAIRGLKQLQSLHLHKNRIEQLDALNFLNLPVLNLLNLAGNQIHELNRQAFLNVPSLRY 260

  Fly   447 LTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVP-RALQDLAMLRTLDLGENQIRTFDNQSFK 510
            |.|:.|.|:.:....|:....|:.|||::|::..:| .:|..|..||.|.|..|:|....:.:|.
 Worm   261 LYLSGNKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISSNAFT 325

  Fly   511 NLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLAD 575
            | ..:..|.|..|::..:|.|:...||.|..::...|:|::|.|.:|.....|..:.|.:|.|.:
 Worm   326 N-SSIVVLVLSSNELKTLTAGIISGLPNLQQVSFRDNQIKTINRNAFYDAASLVMLDLAKNQLTE 389

  Fly   576 I-NGVFATLVSLLWLNLSENHLVWFDYAFIPSNLKWLDIHGNYIEALGNYYKLQEEIRVKTLDAS 639
            | ...|...::||.::||||.|....|:...|.:..:.:..|.:....|.:.||:...|...| |
 Worm   390 IAPTTFLAQLNLLLVDLSENKLPKTPYSAFNSRVGTVLLKENPLVCTENLHMLQQGTGVYVRD-S 453

  Fly   640 HNRITEIGPMSIPNTIELLFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQLQQLRVAPVVA 704
            .:.|....|...|..:.:..:.::||...:| |.|             |:.|:|:.  |......
 Worm   454 PDIICGRKPTPKPEPVLVPIVTDSLISTQRP-ALV-------------QIPKMQIH--RNVHTTT 502

  Fly   705 PKPLPEFYLGGNPFECDCTMDWLQRINNLTTRQHPR-----VMDMANIECVMPHARGAAVRPLSG 764
            ....|:...|.           .|:|:...:|..||     ::|       .|..|..:|.|...
 Worm   503 GDQAPQIPSGA-----------FQQIDLGKSRSLPRGHSRFILD-------KPSTREQSVEPTEE 549

  Fly   765 LRP 767
            |.|
 Worm   550 LTP 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-7NP_523797.1 LRR_8 135..201 CDD:290566 17/77 (22%)
leucine-rich repeat 136..159 CDD:275380 10/24 (42%)
leucine-rich repeat 160..190 CDD:275380 4/29 (14%)
LRR_8 189..259 CDD:290566 13/80 (16%)
leucine-rich repeat 191..214 CDD:275380 5/22 (23%)
leucine-rich repeat 215..248 CDD:275380 7/32 (22%)
LRR_RI 247..501 CDD:238064 68/255 (27%)
LRR_8 247..308 CDD:290566 13/60 (22%)
leucine-rich repeat 249..273 CDD:275380 0/23 (0%)
leucine-rich repeat 274..297 CDD:275380 8/22 (36%)
LRR_8 297..356 CDD:290566 12/58 (21%)
leucine-rich repeat 298..321 CDD:275380 5/22 (23%)
leucine-rich repeat 322..345 CDD:275380 4/22 (18%)
LRR_8 345..406 CDD:290566 19/61 (31%)
leucine-rich repeat 346..371 CDD:275380 7/24 (29%)
leucine-rich repeat 372..395 CDD:275380 7/23 (30%)
leucine-rich repeat 396..419 CDD:275380 9/22 (41%)
LRR_8 419..478 CDD:290566 20/58 (34%)
leucine-rich repeat 420..443 CDD:275380 9/22 (41%)
leucine-rich repeat 444..467 CDD:275380 6/22 (27%)
LRR_RI 466..622 CDD:238064 45/157 (29%)
leucine-rich repeat 468..488 CDD:275380 7/20 (35%)
LRR_8 491..549 CDD:290566 17/57 (30%)
leucine-rich repeat 491..514 CDD:275380 8/22 (36%)
leucine-rich repeat 515..536 CDD:275380 5/20 (25%)
leucine-rich repeat 539..562 CDD:275380 6/22 (27%)
leucine-rich repeat 563..585 CDD:275380 6/22 (27%)
leucine-rich repeat 586..626 CDD:275380 11/39 (28%)
leucine-rich repeat 627..653 CDD:275380 7/25 (28%)
LRRCT 716..772 CDD:214507 12/57 (21%)
LRRNT 796..830 CDD:214470
leucine-rich repeat 812..829 CDD:275380
leucine-rich repeat 833..854 CDD:275380
LRR_8 853..913 CDD:290566
leucine-rich repeat 855..878 CDD:275380
LRR_4 878..918 CDD:289563
leucine-rich repeat 879..902 CDD:275380
leucine-rich repeat 903..926 CDD:275380
leucine-rich repeat 927..953 CDD:275380
TIR 1098..1235 CDD:214587
let-4NP_510425.2 leucine-rich repeat 66..86 CDD:275380 5/20 (25%)
LRR_RI <71..275 CDD:238064 65/263 (25%)
LRR_8 88..146 CDD:290566 20/91 (22%)
leucine-rich repeat 88..111 CDD:275380 7/56 (13%)
leucine-rich repeat 112..135 CDD:275380 8/22 (36%)
leucine-rich repeat 136..160 CDD:275380 9/46 (20%)
LRR_8 156..220 CDD:290566 20/65 (31%)
leucine-rich repeat 161..184 CDD:275380 7/24 (29%)
leucine-rich repeat 186..209 CDD:275380 7/22 (32%)
leucine-rich repeat 210..257 CDD:275380 18/46 (39%)
LRR_RI <250..411 CDD:238064 48/161 (30%)
LRR_8 256..316 CDD:290566 19/59 (32%)
leucine-rich repeat 258..281 CDD:275380 6/22 (27%)
leucine-rich repeat 282..305 CDD:275380 8/22 (36%)
leucine-rich repeat 306..328 CDD:275380 8/22 (36%)
LRR_8 327..387 CDD:290566 16/59 (27%)
leucine-rich repeat 329..350 CDD:275380 5/20 (25%)
leucine-rich repeat 353..400 CDD:275380 12/46 (26%)
leucine-rich repeat 356..376 CDD:275380 5/19 (26%)
leucine-rich repeat 401..419 CDD:275380 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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