DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56h and Obp83b

DIOPT Version :9

Sequence 1:NP_001188979.1 Gene:Obp56h / 37271 FlyBaseID:FBgn0034475 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_524242.2 Gene:Obp83b / 40738 FlyBaseID:FBgn0010403 Length:141 Species:Drosophila melanogaster


Alignment Length:124 Identity:38/124 - (30%)
Similarity:55/124 - (44%) Gaps:15/124 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AFLSMGQCNPDFRQIMQQCMETNQVTEADLKEFMASGMQSSAKENLKCYTKCLM-EKQGHLTNGQ 75
            |.|.:|:   .|..|   |.....||:..:|||  |..|....|.||||..||. |.:....||.
  Fly    29 AILKLGK---HFHDI---CAPKTGVTDEAIKEF--SDGQIHEDEALKCYMNCLFHEFEVVDDNGD 85

  Fly    76 FNAQAMLDTLKNVPQIKDKMDEISSGVNACKDIKGTNDCDTAFKVTMCLKEHKAIPGHH 134
            .:.:.:|:.:.. .::::.|.|.|.|   |...:|...|..|:....|.|  ||.|.|:
  Fly    86 VHMEKVLNAIPG-EKLRNIMMEASKG---CIHPEGDTLCHKAWWFHQCWK--KADPVHY 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56hNP_001188979.1 PhBP 26..128 CDD:214783 30/102 (29%)
Obp83bNP_524242.2 PBP_GOBP 28..133 CDD:279703 34/117 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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