DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56h and Obp28a

DIOPT Version :9

Sequence 1:NP_001188979.1 Gene:Obp56h / 37271 FlyBaseID:FBgn0034475 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster


Alignment Length:111 Identity:31/111 - (27%)
Similarity:50/111 - (45%) Gaps:17/111 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QQCMETNQVTEADLKEFMASGMQSSAKENLKCYTKCLMEKQGHL-TNGQFNAQAMLDTLK----N 87
            :.||.....|:|||:|.:..  |.::....||...|:|:..|.| .||:.:.:|..:..|    |
  Fly    36 ESCMPEVGATDADLQEMVKK--QPASTYAGKCLRACVMKNIGILDANGKLDTEAGHEKAKQYTGN 98

  Fly    88 VP-QIKDKMDEISSGVNACKDIKGTND-CDTAFKVTMCL----KEH 127
            .| ::|..: ||.   :.|..|...:| |:.|.....|.    |:|
  Fly    99 DPAKLKIAL-EIG---DTCAAITVPDDHCEAAEAYGTCFRGEAKKH 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56hNP_001188979.1 PhBP 26..128 CDD:214783 31/111 (28%)
Obp28aNP_523505.1 PhBP 35..134 CDD:214783 29/103 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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