DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56g and Obp83cd

DIOPT Version :9

Sequence 1:NP_995903.1 Gene:Obp56g / 37270 FlyBaseID:FBgn0034474 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster


Alignment Length:121 Identity:24/121 - (19%)
Similarity:50/121 - (41%) Gaps:20/121 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ILAQQANIDSSVSKELVTDCLKENGVTPQDLADLQSGKVKAEDA------KDNVKCSSQCILVKS 75
            ::....||..| :|:.:.|||:          |:...:.|:.||      .:.:.|.::|.:.|.
  Fly   135 VIDNMPNISPS-AKDAMKDCLQ----------DVHQDEWKSFDAFAYYPVNEPIPCFTRCFVDKL 188

  Fly    76 GFMDSTGKLLTDKIKSYYANSNFKDVIEKDLDRCSAVKGANACDTAFKILSCFQAA 131
            ...:...:|.  |:::...|........: :..|...:|.:.|.|.:|..:|:..|
  Fly   189 HIFEEKTRLW--KLEAMKQNLGIPAKGAR-IRTCHRHRGRDRCATYYKQFTCYAMA 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56gNP_995903.1 PBP_GOBP 30..131 CDD:279703 20/106 (19%)
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783
PhBP 149..242 CDD:214783 20/106 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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