DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56g and Obp19d

DIOPT Version :9

Sequence 1:NP_995903.1 Gene:Obp56g / 37270 FlyBaseID:FBgn0034474 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_523421.2 Gene:Obp19d / 33040 FlyBaseID:FBgn0011280 Length:150 Species:Drosophila melanogaster


Alignment Length:135 Identity:38/135 - (28%)
Similarity:61/135 - (45%) Gaps:20/135 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LTLLLGCLSGILAQQA-------NIDSSVSKELVTDCLKENGVTPQDLADLQSGKVKAEDAKDNV 64
            ||:||  |.|||...|       .|:...:.||..:|..|.|.|.:|:..|.|..:   ..:...
  Fly     7 LTVLL--LVGILCLGATSAKPHEEINRDHAAELANECKAETGATDEDVEQLMSHDL---PERHEA 66

  Fly    65 KCSSQCILVKSGFMDSTGKLLTD------KIKSYYANSNFKDVIEKDLDRCSAVK-GANACDTAF 122
            ||...|::.|...||.:|||..:      |:.|.: ::..:|...:.:.:|.|:: ..:.||.||
  Fly    67 KCLRACVMKKLQIMDESGKLNKEHAIELVKVMSKH-DAEKEDAPAEVVAKCEAIETPEDHCDAAF 130

  Fly   123 KILSC 127
            ....|
  Fly   131 AYEEC 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56gNP_995903.1 PBP_GOBP 30..131 CDD:279703 28/105 (27%)
Obp19dNP_523421.2 PBP_GOBP 23..139 CDD:279703 29/117 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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