DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56g and Obp19c

DIOPT Version :9

Sequence 1:NP_995903.1 Gene:Obp56g / 37270 FlyBaseID:FBgn0034474 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_608392.1 Gene:Obp19c / 33039 FlyBaseID:FBgn0031111 Length:175 Species:Drosophila melanogaster


Alignment Length:118 Identity:33/118 - (27%)
Similarity:51/118 - (43%) Gaps:17/118 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ANIDSSVS--KELVT----DCLKENGVTPQDLADLQSGKVKAEDAKDNVKCSSQCILVKSGFMDS 80
            |.||.::.  :||||    :|:::..: |:|...|  |||.....|:  ||..:|:|.|...||:
  Fly    49 AVIDRNLPQVQELVTAARMECIQKLQL-PRDQRPL--GKVTNPSEKE--KCLVECVLKKIKLMDA 108

  Fly    81 TGKL---LTDKIKSYYANSNFKDVIEKD--LDRCS-AVKGANACDTAFKILSC 127
            ..||   ..:|:.|.....|...:....  ...|| .:...|.|:.|.....|
  Fly   109 DNKLNVGQVEKLTSLVTQDNKMAIAVSSSMAQACSRGISSKNPCEVAHLFNQC 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56gNP_995903.1 PBP_GOBP 30..131 CDD:279703 30/108 (28%)
Obp19cNP_608392.1 PhBP 65..164 CDD:214783 26/102 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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