DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56g and Obp56c

DIOPT Version :9

Sequence 1:NP_995903.1 Gene:Obp56g / 37270 FlyBaseID:FBgn0034474 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster


Alignment Length:144 Identity:26/144 - (18%)
Similarity:58/144 - (40%) Gaps:46/144 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DSSVSKELVTDCLK-----------------------ENGVTP---------QDLADLQ---SGK 54
            ::.:|:|::..|::                       :|.:.|         .:|.||.   :.:
  Fly    58 ENKLSQEMLRACMRRTEISMSQLKLFHMSLMNSDYNNDNDIAPTPVQSIGDVNNLGDLDFNGNSQ 122

  Fly    55 VKAEDAKDN--VKCSSQCILVKSGFMDSTGKLLTDKIKSYYANSNFKDVIE---KDLDRCSAVKG 114
            :...|.|.|  ::|...| |.::..:|....||.:..|     :..:.:|:   .::..||.::|
  Fly   123 MPYLDLKHNEPLQCFVSC-LYETLDLDRYNVLLEEAFK-----NQVQTIIQHEKAEIKECSDLQG 181

  Fly   115 ANACDTAFKILSCF 128
            ...|:.|:|:..|:
  Fly   182 KTRCEAAYKLHLCY 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56gNP_995903.1 PBP_GOBP 30..131 CDD:279703 25/139 (18%)
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 17/75 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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