DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or56a and Or98a

DIOPT Version :10

Sequence 1:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_524536.2 Gene:Or98a / 43341 FlyBaseID:FBgn0039551 Length:397 Species:Drosophila melanogaster


Alignment Length:432 Identity:80/432 - (18%)
Similarity:152/432 - (35%) Gaps:93/432 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DLLLSPTTFEDPIFGTHLRYFQWYGYVA----SKDQNRPLLSLIRCTILTASIWLSCALMLARVF 66
            :||.||.:|         |||: ||...    :...::.:..:..|.|..   |.:..|.:..:.
  Fly    13 NLLTSPDSF---------RYFE-YGMFCMGWHTPATHKIIYYITSCLIFA---WCAVYLPIGIII 64

  Fly    67 RGYENLND-GATSYATAVQYFAVSIAM------FNAYVQRDKVISLLRVAHSDIQNLMHEADNRE 124
            ....::|. ......|.:|.|..|:.|      ||.|:.          .....:.|:.|.|.|.
  Fly    65 SFKTDINTFTPNELLTVMQLFFNSVGMPFKVLFFNLYIS----------GFYKAKKLLSEMDKRC 119

  Fly   125 MELLVATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLPKSVFNVPAVRRGEEHPILLFQLF- 188
            ..|....:.:          ..|:....||  .||:.::...::....:.....:.|..::..| 
  Fly   120 TTLKERVEVH----------QGVVRCNKAY--LIYQFIYTAYTISTFLSAALSGKLPWRIYNPFV 172

  Fly   189 PFGELCDNFVVGYLGPWYALGLGITAIPLW----------HTFITCLMKYVNLKLQILNKRVEEM 243
            .|.|...:|       |.| .|..||:.|:          :..:..|:..|:|||  |..|||.:
  Fly   173 DFRESRSSF-------WKA-ALNETALMLFAVTQTLMSDIYPLLYGLILRVHLKL--LRLRVESL 227

  Fly   244 DITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLICVPVMADFIIFSV---- 304
            ....       |:..|..    :..|.| .:|:...|..:...::..:...:...|::..:    
  Fly   228 CTDS-------GKSDAEN----EQDLIK-CIKDHNLIIDYAAAIRPAVTRTIFVQFLLIGICLGL 280

  Fly   305 -LICFLFFA-LTVGVPSKMDYFFMFIYLFVMAGILWIYHWHATLIVECHDELSLAYFSCGWYNFE 367
             :|..|||| :..|:.:......:.:..|....:..:......|:|.       |.|...|.|..
  Fly   281 SMINLLFFADIWTGLATVAYINGLMVQTFPFCFVCDLLKKDCELLVS-------AIFHSNWINSS 338

  Fly   368 MPLQKMLVFMMMHAQRPMKMRA-LLVDLNLRTFIDIGRGAYS 408
            ...:..|.:.:.:||:.:...| .:..::..:.|.:.:.|:|
  Fly   339 RSYKSSLRYFLKNAQKSIAFTAGSIFPISTGSNIKVAKLAFS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 51/298 (17%)
Or98aNP_524536.2 7tm_6 74..379 CDD:251636 63/355 (18%)

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