DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or56a and Or85a

DIOPT Version :10

Sequence 1:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_524277.1 Gene:Or85a / 40991 FlyBaseID:FBgn0037576 Length:397 Species:Drosophila melanogaster


Alignment Length:396 Identity:66/396 - (16%)
Similarity:144/396 - (36%) Gaps:84/396 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 IWLSCALMLARVFRGYENLNDGA---TSYATAVQYFAVSIAM-FNAYVQRDKVISLLRVAHSDIQ 114
            ||....::|..:|..|..:..|.   .::.|...:..|.:.: .||.:.:..::..:|...|..|
  Fly    48 IWTLVVIVLVFIFIPYGLIMTGIKEFKNFTTTDLFTYVQVPVNTNASIMKGIIVLFMRRRFSRAQ 112

  Fly   115 NLMHEADNR--EMELLV----ATQAYTRTITL-----LIWIPSVIAGLMAYSD---CIYRSLFLP 165
            .:|...|.|  :||..|    |.....|.:.:     ..::...:.|.:....   |:|..|..|
  Fly   113 KMMDAMDIRCTKMEEKVQVHRAAALCNRVVVIYHCIYFGYLSMALTGALVIGKTPFCLYNPLVNP 177

  Fly   166 KSVFNV-PAVRRGEEHPILLFQLFPFGELCDNFVVGYLGPWYALGLGITAIPLWHTFITCLMKYV 229
            ...|.: .|:.......|:|..|.                       :...|:.:..:      :
  Fly   178 DDHFYLATAIESVTMAGIILANLI-----------------------LDVYPIIYVVV------L 213

  Fly   230 NLKLQILNKRVEEM--DITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLIC 292
            .:.:::|::|::.:  |:.:.:.:      ..:||.        |.||:...|.::...|:.:|.
  Fly   214 RIHMELLSERIKTLRTDVEKGDDQ------HYAELV--------ECVKDHKLIVEYGNTLRPMIS 264

  Fly   293 VPVMADFIIFSVLICFLFFALTVGVPSKMDYFFMFIYLFVMAGILWIYHWHAT---------LIV 348
            .         ::.|..|...|.:|:.:....|:..:...|::|:..|.....|         |..
  Fly   265 A---------TMFIQLLSVGLLLGLAAVSMQFYNTVMERVVSGVYTIAILSQTFPFCYVCEQLSS 320

  Fly   349 ECHDELSLAYFSCGWYNFEMPLQKMLVFMMMHAQRPMKMRA-LLVDLNLRTFIDIGRGAYSYFNL 412
            :| :.|:...|...|...|...:..:::.:.:.|:.:...| .:..:.|.|.|.:.:.|:|...:
  Fly   321 DC-ESLTNTLFHSKWIGAERRYRTTMLYFIHNVQQSILFTAGGIFPICLNTNIKMAKFAFSVVTI 384

  Fly   413 LRSSHL 418
            :....|
  Fly   385 VNEMDL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 46/305 (15%)
Or85aNP_524277.1 7tm_6 77..379 CDD:251636 57/354 (16%)

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