DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or56a and Or49a

DIOPT Version :10

Sequence 1:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_523711.3 Gene:Or49a / 36350 FlyBaseID:FBgn0033727 Length:396 Species:Drosophila melanogaster


Alignment Length:453 Identity:80/453 - (17%)
Similarity:173/453 - (38%) Gaps:114/453 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TFEDPIFGTHLRY-------FQ----WYGYVASKDQNRPLLSLIRCTILTASIWLSCALMLARVF 66
            ::||.||..::.:       |.    |:.|:..:..      .:.|||   |.:...:::..|:.
  Fly     6 SYEDFIFMANMMFKTLGYDLFHTPKPWWRYLLVRGY------FVLCTI---SNFYEASMVTTRII 61

  Fly    67 RGYENLNDGATSYATAVQYF----AVSIAMFNAYVQRDKVISLLRVAHSDIQNLMHEADN-REME 126
            . :|:|....:.......:|    :..:......:.|.:   ||:::|...:...|:..| |:.|
  Fly    62 E-WESLAGSPSKIMRQGLHFFYMLSSQLKFITFMINRKR---LLQLSHRLKELYPHKEQNQRKYE 122

  Fly   127 LLVATQAY----TRTITLLIWIPSVIAGL-------------MAYSDCIYRSLFLPKSVFNVPAV 174
            :   .:.|    ||.:..:.:...|:..|             ...:|..|:.:|..:..|:    
  Fly   123 V---NKYYLSCSTRNVLYVYYFVMVVMALEPLVQSCIMYLIGFGKADFTYKRIFPTRLTFD---- 180

  Fly   175 RRGEEHP---ILLFQL-FPFGELCDNFVVGYLGPWYALGLGITAIPLWHTFITCLMKYVNLKLQI 235
               .|.|   :|.:.: |.:.:...|..:|              ..||   :.|:...:::.|..
  Fly   181 ---SEKPLGYVLAYVIDFTYSQFIVNVSLG--------------TDLW---MMCVSSQISMHLGY 225

  Fly   236 L---------NKRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLI 291
            |         :...|:.|...|.|  :|.|                   .||.|| ..:::.|:.
  Fly   226 LANMLASIRPSPETEQQDCDFLAS--IIKR-------------------HQLMIR-LQKDVNYVF 268

  Fly   292 CVPVMADFIIFSVLICFL-FFALTVGVP-SKMDYFFMFIYLFVMAGILWIYHWHATLIVECHDEL 354
            .:.:.::....|.|:|.: ::.:..|.. ..:.|..:|.   .:|...::...|..::::....|
  Fly   269 GLLLASNLFTTSCLLCCMAYYTVVEGFNWEGISYMMLFA---SVAAQFYVVSSHGQMLIDLSTNL 330

  Fly   355 SLAYFSCGWYNFEMPLQKMLVFMMMHAQRPMKMRAL-LVDLNLRTFIDIGRGAYSYFNLLRSS 416
            :.|.|...||...:..:|.::.:|..||||:::.|. ::.::|.||..:....|.:|.::|.:
  Fly   331 AKAAFESKWYEGSLRYKKEILILMAQAQRPLEISARGVIIISLDTFKILMTITYRFFAVIRQT 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 55/313 (18%)
Or49aNP_523711.3 7tm_6 88..384 CDD:251636 62/350 (18%)

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