DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or56a and Or49a

DIOPT Version :9

Sequence 1:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_523711.3 Gene:Or49a / 36350 FlyBaseID:FBgn0033727 Length:396 Species:Drosophila melanogaster


Alignment Length:453 Identity:80/453 - (17%)
Similarity:173/453 - (38%) Gaps:114/453 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TFEDPIFGTHLRY-------FQ----WYGYVASKDQNRPLLSLIRCTILTASIWLSCALMLARVF 66
            ::||.||..::.:       |.    |:.|:..:..      .:.|||   |.:...:::..|:.
  Fly     6 SYEDFIFMANMMFKTLGYDLFHTPKPWWRYLLVRGY------FVLCTI---SNFYEASMVTTRII 61

  Fly    67 RGYENLNDGATSYATAVQYF----AVSIAMFNAYVQRDKVISLLRVAHSDIQNLMHEADN-REME 126
            . :|:|....:.......:|    :..:......:.|.:   ||:::|...:...|:..| |:.|
  Fly    62 E-WESLAGSPSKIMRQGLHFFYMLSSQLKFITFMINRKR---LLQLSHRLKELYPHKEQNQRKYE 122

  Fly   127 LLVATQAY----TRTITLLIWIPSVIAGL-------------MAYSDCIYRSLFLPKSVFNVPAV 174
            :   .:.|    ||.:..:.:...|:..|             ...:|..|:.:|..:..|:    
  Fly   123 V---NKYYLSCSTRNVLYVYYFVMVVMALEPLVQSCIMYLIGFGKADFTYKRIFPTRLTFD---- 180

  Fly   175 RRGEEHP---ILLFQL-FPFGELCDNFVVGYLGPWYALGLGITAIPLWHTFITCLMKYVNLKLQI 235
               .|.|   :|.:.: |.:.:...|..:|              ..||   :.|:...:::.|..
  Fly   181 ---SEKPLGYVLAYVIDFTYSQFIVNVSLG--------------TDLW---MMCVSSQISMHLGY 225

  Fly   236 L---------NKRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQYLI 291
            |         :...|:.|...|.|  :|.|                   .||.|| ..:::.|:.
  Fly   226 LANMLASIRPSPETEQQDCDFLAS--IIKR-------------------HQLMIR-LQKDVNYVF 268

  Fly   292 CVPVMADFIIFSVLICFL-FFALTVGVP-SKMDYFFMFIYLFVMAGILWIYHWHATLIVECHDEL 354
            .:.:.::....|.|:|.: ::.:..|.. ..:.|..:|.   .:|...::...|..::::....|
  Fly   269 GLLLASNLFTTSCLLCCMAYYTVVEGFNWEGISYMMLFA---SVAAQFYVVSSHGQMLIDLSTNL 330

  Fly   355 SLAYFSCGWYNFEMPLQKMLVFMMMHAQRPMKMRAL-LVDLNLRTFIDIGRGAYSYFNLLRSS 416
            :.|.|...||...:..:|.::.:|..||||:::.|. ::.::|.||..:....|.:|.::|.:
  Fly   331 AKAAFESKWYEGSLRYKKEILILMAQAQRPLEISARGVIIISLDTFKILMTITYRFFAVIRQT 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 55/313 (18%)
Or49aNP_523711.3 7tm_6 88..384 CDD:251636 62/350 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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