DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or56a and Or24a

DIOPT Version :10

Sequence 1:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:402 Identity:87/402 - (21%)
Similarity:139/402 - (34%) Gaps:113/402 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 WYGYVASKDQNRPLLSLIRCTILTASIWLSCALMLARVFRGYENLNDGATSYATAVQY-FAVSIA 91
            ||     :|:.|.|:..:|              .|....:....|......|..|.|. |.:...
  Fly    94 WY-----QDELRSLIERVR--------------FLTEQQKSKRKLGYKKRFYTLATQLTFLLLCC 139

  Fly    92 MF---NAYVQRDKVISLLRVAHSDIQNLMHEADNREM--ELLVATQAYTRTITLLIWIPSVIAGL 151
            .|   .:|..|..:.::||..|.  ::.::|...:.|  :||:....|..|..|:.|        
  Fly   140 GFCTSTSYSVRHLIDNILRRTHG--KDWIYETPFKMMFPDLLLRLPLYPITYILVHW-------- 194

  Fly   152 MAYSDCIYRSLFLPKSVFNVPAVRRGEEHPILLFQLFPFGELCDNFVVGYLGPWYALGLGITAIP 216
                                        |..:....| .|  .|.|.:|:.              
  Fly   195 ----------------------------HGYITVVCF-VG--ADGFFLGFC-------------- 214

  Fly   217 LWHT-FITCLMKYVNLKLQILN-----KRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVK 275
            |:.| .:.||...|...|::.|     ...||..|.|...|||......:|||   .:|  ..|.
  Fly   215 LYFTVLLLCLQDDVCDLLEVENIEKSPSEAEEARIVREMEKLVDRHNEVAELT---ERL--SGVM 274

  Fly   276 EQLRIRKFVQELQYLICVPVMADFIIFSVL--ICFLFFALTVGVPSKMDYFFMFIYLFVMAGILW 338
            .::.:..||  ...||....:.|.::||.|  |.::.:...|||.         |:|:.:.|   
  Fly   275 VEITLAHFV--TSSLIIGTSVVDILLFSGLGIIVYVVYTCAVGVE---------IFLYCLGG--- 325

  Fly   339 IYHWHATLIVECHDELSLAYFSCGWYNFEMPLQKMLVFMMMHAQRPMKMRALLVDLNLRTFIDIG 403
                  :.|:|....|:.:.||..||...:.:|||.:.|:..|||.:.::......:|.|...|.
  Fly   326 ------SHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQRVLTIKIPFFSPSLETLTSIL 384

  Fly   404 RGAYSYFNLLRS 415
            |...|...|.:|
  Fly   385 RFTGSLIALAKS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 64/288 (22%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 84/392 (21%)

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