DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8517 and TRX1

DIOPT Version :9

Sequence 1:NP_611446.3 Gene:CG8517 / 37268 FlyBaseID:FBgn0034472 Length:145 Species:Drosophila melanogaster
Sequence 2:NP_013144.1 Gene:TRX1 / 850732 SGDID:S000004033 Length:103 Species:Saccharomyces cerevisiae


Alignment Length:86 Identity:35/86 - (40%)
Similarity:56/86 - (65%) Gaps:2/86 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 ETRKDFEQRVINSDRPVVVDFHASWCCPCKALAPRLENVVSEQEGRVRLARVDIDEHGELALDYN 99
            :|..:|:. .|..|:.|||||:|:||.|||.:||.:|. .|||..:....::|:||.|::|....
Yeast     6 KTASEFDS-AIAQDKLVVVDFYATWCGPCKMIAPMIEK-FSEQYPQADFYKLDVDELGDVAQKNE 68

  Fly   100 VGSVPSLVVISNGKVVNRMVG 120
            |.::|:|::..|||.|.::||
Yeast    69 VSAMPTLLLFKNGKEVAKVVG 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8517NP_611446.3 Thioredoxin_like 36..135 CDD:412351 35/85 (41%)
TRX1NP_013144.1 thioredoxin 6..103 CDD:200072 35/86 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1127
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.760

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