DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8517 and pdia8

DIOPT Version :9

Sequence 1:NP_611446.3 Gene:CG8517 / 37268 FlyBaseID:FBgn0034472 Length:145 Species:Drosophila melanogaster
Sequence 2:NP_001003517.1 Gene:pdia8 / 445123 ZFINID:ZDB-GENE-040801-20 Length:493 Species:Danio rerio


Alignment Length:98 Identity:31/98 - (31%)
Similarity:51/98 - (52%) Gaps:5/98 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TRKDFEQRVINSDRPVVVDFHASWCCPCKALAPRLENVVSEQEGRVRLARVDIDEHGELALDYNV 100
            |..||:. :......::|.|:|.||..||.|||..|:..|..:|.|.||:||...:.|:...|.|
Zfish    31 TDADFDY-LAPEHETLLVKFYAPWCGHCKKLAPEFESAASRLKGTVTLAKVDCTANTEICKHYGV 94

  Fly   101 GSVPSLVVISNGKVVNRMVGLQTS----EYLRK 129
            ...|:|.:..||:..:...|.:::    :|::|
Zfish    95 NGYPTLKIFRNGQESSSYDGPRSADGIVDYMKK 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8517NP_611446.3 Thioredoxin_like 36..135 CDD:412351 31/98 (32%)
pdia8NP_001003517.1 ER_PDI_fam 25..484 CDD:273457 31/98 (32%)
pdi_dom 30..129 CDD:273454 31/98 (32%)
PDI_b_ERp57 132..236 CDD:239367
PDI_b'_ERp72_ERp57 240..353 CDD:239371
PDI_a_PDI_a'_C 373..476 CDD:239293
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.