DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8517 and Txn1

DIOPT Version :9

Sequence 1:NP_611446.3 Gene:CG8517 / 37268 FlyBaseID:FBgn0034472 Length:145 Species:Drosophila melanogaster
Sequence 2:NP_035790.1 Gene:Txn1 / 22166 MGIID:98874 Length:105 Species:Mus musculus


Alignment Length:88 Identity:27/88 - (30%)
Similarity:48/88 - (54%) Gaps:2/88 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VETRKDFEQRVINS-DRPVVVDFHASWCCPCKALAPRLENVVSEQEGRVRLARVDIDEHGELALD 97
            :|:::.|::.:..: |:.|||||.|:||.|||.:.|...::..:....|.| .||:|:..::|.|
Mouse     5 IESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFL-EVDVDDCQDVAAD 68

  Fly    98 YNVGSVPSLVVISNGKVVNRMVG 120
            ..|..:|:......|:.|....|
Mouse    69 CEVKCMPTFQFYKKGQKVGEFSG 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8517NP_611446.3 Thioredoxin_like 36..135 CDD:412351 26/86 (30%)
Txn1NP_035790.1 Thioredoxin 4..103 CDD:365862 27/88 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.