DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8517 and trx-1

DIOPT Version :9

Sequence 1:NP_611446.3 Gene:CG8517 / 37268 FlyBaseID:FBgn0034472 Length:145 Species:Drosophila melanogaster
Sequence 2:NP_001021885.1 Gene:trx-1 / 181863 WormBaseID:WBGene00015062 Length:115 Species:Caenorhabditis elegans


Alignment Length:96 Identity:30/96 - (31%)
Similarity:56/96 - (58%) Gaps:2/96 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RKDFEQRV-INSDRPVVVDFHASWCCPCKALAPRLENVVSEQEGRVRLARVDIDEHGELALDYNV 100
            :.||||.: .:.::.:::||:|:||.||||:||..:.:.:..:| :...:||:||..:|...|:|
 Worm    15 QSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELATTHKG-IIFCKVDVDEAEDLCSKYDV 78

  Fly   101 GSVPSLVVISNGKVVNRMVGLQTSEYLRKWL 131
            ..:|:.:...||..:..:.|....|..:|.|
 Worm    79 KMMPTFIFTKNGDAIEALEGCVEDELRQKVL 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8517NP_611446.3 Thioredoxin_like 36..135 CDD:412351 30/96 (31%)
trx-1NP_001021885.1 Thioredoxin 16..111 CDD:278513 30/95 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 1 1.000 - - FOG0000170
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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