DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8517 and Txnl1

DIOPT Version :9

Sequence 1:NP_611446.3 Gene:CG8517 / 37268 FlyBaseID:FBgn0034472 Length:145 Species:Drosophila melanogaster
Sequence 2:XP_006254889.1 Gene:Txnl1 / 140922 RGDID:621717 Length:292 Species:Rattus norvegicus


Alignment Length:131 Identity:31/131 - (23%)
Similarity:55/131 - (41%) Gaps:23/131 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GMTSTGKQPIFDVETRKDFEQRVINS-DRPVVVDFHASWCCPCKALAPRLENVVSEQEGRVRLAR 85
            |:...|..|        ||:..:..: .|..||.|....|.||..:||...::.::....|.| .
  Rat     3 GVKPVGSDP--------DFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFL-E 58

  Fly    86 VDIDEHGELALDYNVGSVPSLVVISNGKVVNR-----MVGLQTSEYLRKWLHKAVPHPP--PEDT 143
            ||:.:....|...|:.:.|:.:...|...:::     .|||:  |.:::.|.    :.|  .|||
  Rat    59 VDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLE--EKIKQHLE----NDPGSNEDT 117

  Fly   144 E 144
            :
  Rat   118 D 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8517NP_611446.3 Thioredoxin_like 36..135 CDD:412351 24/104 (23%)
Txnl1XP_006254889.1 TRX_family 12..104 CDD:239245 23/94 (24%)
PITH 126..268 CDD:283785
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100096
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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