DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56d and Obp83cd

DIOPT Version :10

Sequence 1:NP_611444.2 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster
Sequence 2:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster


Alignment Length:139 Identity:33/139 - (23%)
Similarity:54/139 - (38%) Gaps:27/139 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIVLSVILAISAAELQLSDEQKAVAHANGALCAQQ-EGITKDQAIAL-RNGNFDDSDPKVKCFAN 66
            ||.|.:.|:::.....|..|.:.:..     |.|. .|:|.:.|..| |...:.||..::.||..
  Fly     8 LIALCLCLSLNEGLALLEHEGETINR-----CIQNYGGLTAENAERLERFKEWSDSYEEIPCFTR 67

  Fly    67 CFLEKI--------GFLINGEVQPDVVLAKLGPLAGEDAVKAVQAKCDA--TKGADKCDTAYQLF 121
            |:|.::        ||..:|.|          .:.|....:|.:.|.:.  ..|...|..||:.|
  Fly    68 CYLSEMFDFYNNLTGFNKDGIV----------GVFGRPVYEACRKKLELPFESGESSCKHAYEGF 122

  Fly   122 ECYYKNRAH 130
            .|.....:|
  Fly   123 HCITNMESH 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56dNP_611444.2 PBP_GOBP 19..127 CDD:460193 28/119 (24%)
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 26/113 (23%)
PhBP 149..242 CDD:214783
Blue background indicates that the domain is not in the aligned region.

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