DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56d and Obp56c

DIOPT Version :9

Sequence 1:NP_001286619.1 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster
Sequence 2:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster


Alignment Length:90 Identity:20/90 - (22%)
Similarity:33/90 - (36%) Gaps:28/90 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NGN-------FDDSDPKVKCFANCFLEKIGF---------LINGEVQPDVVLAKLGPLAGEDAVK 99
            |||       ...::| ::||.:|..|.:..         ....:||..:           ...|
  Fly   118 NGNSQMPYLDLKHNEP-LQCFVSCLYETLDLDRYNVLLEEAFKNQVQTII-----------QHEK 170

  Fly   100 AVQAKCDATKGADKCDTAYQLFECY 124
            |...:|...:|..:|:.||:|..||
  Fly   171 AEIKECSDLQGKTRCEAAYKLHLCY 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56dNP_001286619.1 PBP_GOBP 19..127 CDD:279703 20/90 (22%)
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 15/81 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006711
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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