DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56b and Obp56a

DIOPT Version :9

Sequence 1:NP_611443.1 Gene:Obp56b / 37265 FlyBaseID:FBgn0046880 Length:137 Species:Drosophila melanogaster
Sequence 2:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster


Alignment Length:129 Identity:34/129 - (26%)
Similarity:61/129 - (47%) Gaps:8/129 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIYLLVVFLIFAL-SELVAGQSAAELAAYKQIQQACIKELNIAASDANLLTTDKEVANPSESVKC 66
            :|.|..:|:..|: |.|.......:||  ||.::.|.:|:.:...:...:.. |:..||:|::||
  Fly     6 VIALSALFVTLAVGSSLNLSDEQKDLA--KQHREQCAEEVKLTEEEKAKVNA-KDFNNPTENIKC 67

  Fly    67 YHSCVYKKLGLLGDDGKPNTDKIVKLAQIRFSSLPVDKLKSLLTSCGTTKSAATCDFVYNYEKC 130
            :.:|.::|:|.|.|.....:..:.||..:    :..:|.|:.|..|.|.|....||.......|
  Fly    68 FANCFFEKVGTLKDGELQESVVLEKLGAL----IGEEKTKAALEKCRTIKGENKCDTASKLYDC 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56bNP_611443.1 PhBP 35..135 CDD:214783 24/96 (25%)
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:279703 28/111 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113266at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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