DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56b and Obp56c

DIOPT Version :9

Sequence 1:NP_611443.1 Gene:Obp56b / 37265 FlyBaseID:FBgn0046880 Length:137 Species:Drosophila melanogaster
Sequence 2:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster


Alignment Length:180 Identity:31/180 - (17%)
Similarity:57/180 - (31%) Gaps:66/180 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVFLIFALS---------------ELVAG-QSAAELAAYKQIQQACIKELNIAASDANLL----- 51
            |:|.||.:|               .||.. .:..|....:::.:||::...|:.|...|.     
  Fly    24 VMFFIFYISFTRSLSVSLNMSMTRTLVPDPPNGTENKLSQEMLRACMRRTEISMSQLKLFHMSLM 88

  Fly    52 ----TTDKEVA-NPSESV----------------------------KCYHSCVYKKLGLLGDDGK 83
                ..|.::| .|.:|:                            :|:.||:|:.|.|      
  Fly    89 NSDYNNDNDIAPTPVQSIGDVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDL------ 147

  Fly    84 PNTDKIVKLAQIRFSS---LPVDKLKSLLTSCGTTKSAATCDFVYNYEKC 130
               |:...|.:..|.:   ..:...|:.:..|...:....|:..|....|
  Fly   148 ---DRYNVLLEEAFKNQVQTIIQHEKAEIKECSDLQGKTRCEAAYKLHLC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56bNP_611443.1 PhBP 35..135 CDD:214783 23/137 (17%)
Obp56cNP_995902.1 PBP_GOBP <125..195 CDD:279703 14/79 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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