DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56b and Obp56c

DIOPT Version :10

Sequence 1:NP_611443.1 Gene:Obp56b / 37265 FlyBaseID:FBgn0046880 Length:137 Species:Drosophila melanogaster
Sequence 2:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster


Alignment Length:180 Identity:31/180 - (17%)
Similarity:57/180 - (31%) Gaps:66/180 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVFLIFALS---------------ELVAG-QSAAELAAYKQIQQACIKELNIAASDANLL----- 51
            |:|.||.:|               .||.. .:..|....:::.:||::...|:.|...|.     
  Fly    24 VMFFIFYISFTRSLSVSLNMSMTRTLVPDPPNGTENKLSQEMLRACMRRTEISMSQLKLFHMSLM 88

  Fly    52 ----TTDKEVA-NPSESV----------------------------KCYHSCVYKKLGLLGDDGK 83
                ..|.::| .|.:|:                            :|:.||:|:.|.|      
  Fly    89 NSDYNNDNDIAPTPVQSIGDVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVSCLYETLDL------ 147

  Fly    84 PNTDKIVKLAQIRFSS---LPVDKLKSLLTSCGTTKSAATCDFVYNYEKC 130
               |:...|.:..|.:   ..:...|:.:..|...:....|:..|....|
  Fly   148 ---DRYNVLLEEAFKNQVQTIIQHEKAEIKECSDLQGKTRCEAAYKLHLC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56bNP_611443.1 PhBP 35..135 CDD:214783 23/137 (17%)
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 14/73 (19%)

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