DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56a and Obp56g

DIOPT Version :9

Sequence 1:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_995903.1 Gene:Obp56g / 37270 FlyBaseID:FBgn0034474 Length:132 Species:Drosophila melanogaster


Alignment Length:131 Identity:36/131 - (27%)
Similarity:63/131 - (48%) Gaps:21/131 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VTLAVGSSLNLSDEQKDL----AKQHREQCAEEVKLTEEEKA-----KVNAKDFNNPTENIKCFA 69
            :||.:|....:..:|.::    :|:....|.:|..:|.::.|     ||.|:|   ..:|:||.:
  Fly     7 LTLLLGCLSGILAQQANIDSSVSKELVTDCLKENGVTPQDLADLQSGKVKAED---AKDNVKCSS 68

  Fly    70 NCFFEKVGTL-KDGELQESVVLEKLGALIGEEKTKAALEK----CRTIKGENKCDTASKLYDCFE 129
            .|...|.|.: ..|:|    :.:|:.:.......|..:||    |..:||.|.||||.|:..||:
  Fly    69 QCILVKSGFMDSTGKL----LTDKIKSYYANSNFKDVIEKDLDRCSAVKGANACDTAFKILSCFQ 129

  Fly   130 S 130
            :
  Fly   130 A 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:279703 31/117 (26%)
Obp56gNP_995903.1 PBP_GOBP 30..131 CDD:279703 32/108 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D128293at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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