DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56a and Obp56d

DIOPT Version :10

Sequence 1:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_611444.2 Gene:Obp56d / 37266 FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster


Alignment Length:125 Identity:55/125 - (44%)
Similarity:81/125 - (64%) Gaps:4/125 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FVIALSALFVTLAVGSS-LNLSDEQKDLAKQHREQCAEEVKLTEEEKAKVNAKDFNNPTENIKCF 68
            |:|.||   |.||:.:: |.||||||.:|..:...||::..:|:::...:...:|::....:|||
  Fly     3 FLIVLS---VILAISAAELQLSDEQKAVAHANGALCAQQEGITKDQAIALRNGNFDDSDPKVKCF 64

  Fly    69 ANCFFEKVGTLKDGELQESVVLEKLGALIGEEKTKAALEKCRTIKGENKCDTASKLYDCF 128
            ||||.||:|.|.:||:|..|||.|||.|.||:..||...||...||.:|||||.:|::|:
  Fly    65 ANCFLEKIGFLINGEVQPDVVLAKLGPLAGEDAVKAVQAKCDATKGADKCDTAYQLFECY 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:460193 46/103 (45%)
Obp56dNP_611444.2 PBP_GOBP 19..127 CDD:460193 47/106 (44%)

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