DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56a and Obp19b

DIOPT Version :10

Sequence 1:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_608391.2 Gene:Obp19b / 33038 FlyBaseID:FBgn0031110 Length:163 Species:Drosophila melanogaster


Alignment Length:152 Identity:33/152 - (21%)
Similarity:62/152 - (40%) Gaps:19/152 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NSYFVIALSALFVTLAVGSSLNLS---DEQKDLAKQHREQCAEEVKLTEEEKAKVNAKDFNNPTE 63
            |....:|.:|:.:..|.......|   ||..:|.:...:.|..:.......:..:|.:|..:.| 
  Fly    15 NLLLAVACAAVLMGSATADEEEGSMTVDEVVELIEPFGDACTPKPSRENIVEMVLNKEDAKHET- 78

  Fly    64 NIKCFANCFFEKVGTLKDGELQ--ESVVLEKLGALI--GEEKTKAALEKC-RTIKGE-NKCDTAS 122
              |||.:|..|:...:.:.:||  |...::.:..:.  .|:..:..::.| ..:|.| :||:.|.
  Fly    79 --KCFRHCMLEQFELMPEDQLQYNEDKTVDMINMMFPDREDDGRRIVKTCNEELKAEQDKCEAAH 141

  Fly   123 KLYDCF------ESFKPAPEAK 138
            .:..|.      ..|| .||.|
  Fly   142 GIAMCMLREMRSSGFK-IPEIK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:460193 23/112 (21%)
Obp19bNP_608391.2 PBP_GOBP 39..150 CDD:460193 23/113 (20%)

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