DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment sm and AT1G06960

DIOPT Version :9

Sequence 1:	NP_001246428.1	Gene:	sm / 37254	FlyBaseID:	FBgn0003435	Length:	552	Species:	Drosophila melanogaster
Sequence 2:	NP_850936.1	Gene:	AT1G06960 / 837206	AraportID:	AT1G06960	Length:	229	Species:	Arabidopsis thaliana

Alignment Length:	159	Identity:	36/159 - (22%)
Similarity:	58/159 - (36%)	Gaps:	39/159 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   337 NLVCL---YGNVARIKFLKTKE--GTAMVQMGDAVAVERCVQHLNNIP-VGTGGKIQIAFSKQNF 395
            :|.||   :|.:..:..|||.:  |.|.|...:..|....|:.:.|.| .....:||.|.||.::
plant    29 SLYCLFSQFGRLLDVVALKTPKLRGQAWVVFTEVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDY 93

  Fly   396 LSEVINPFLLPD------------------HSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILH 442
            :::....|:..:                  ..||......::|...:.|.|.|.....||:.||.
plant    94 VTKAEGSFVPKEKKMKQEEKVERKRHAEETQQPSMPNGATTQNGMPVPPFQPSGQDTMPPNNILF 158

  Fly   443 FFNTP---------------PGLTEDQLI 456
            ..|.|               ||..|.::|
plant   159 IHNLPIETNSMMLQLLFEQYPGFKEIRMI 187

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sm	NP_001246428.1	RRM2_hnRNPL_like	80..165	CDD:241138
		RRM3_hnRNPL_like	319..390	CDD:240870	16/58 (28%)
		RRM4_hnRNPL_like	437..519	CDD:240873	9/35 (26%)
AT1G06960	NP_850936.1	RRM1_U1A_like	12..88	CDD:409692	16/58 (28%)
AT1G06960	NP_850936.1	RRM2_U1A_like	153..225	CDD:409693	9/35 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10501
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100