Sequence 1: | NP_001246428.1 | Gene: | sm / 37254 | FlyBaseID: | FBgn0003435 | Length: | 552 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006228753.3 | Gene: | Hnrnpl / 80846 | RGDID: | 71059 | Length: | 671 | Species: | Rattus norvegicus |
Alignment Length: | 534 | Identity: | 197/534 - (36%) |
---|---|---|---|
Similarity: | 276/534 - (51%) | Gaps: | 111/534 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 VQQPGENDVHM--HARSTPQQNQQQALMNKSNDDLRRKRPETTRPNHILLFTIINPFYPITVDVL 99
Fly 100 HKICHPHGQVLRIVIFKKNGVQAMVEFDNLDAATRARENLNGADIYAGCCTLKIDYAKPEKLNVY 164
Fly 165 KNEPDTSWDYTLSTVKEIGN-GRSPLLQEPLYVATLSTPQQHVSHQHHHHLRQQQQQQHQQQAPQ 228
Fly 229 QQPHPQHLHH--------QQQLVAPAQSHNLYQFKEP----PLLGPGAAFPPFGAPE--YHT--- 276
Fly 277 -----TTPENWKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQ--------------GQAQGAVMMV 322
Fly 323 YGLDHDTSNTDKLFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQ 387
Fly 388 IAFSKQNFLSEVINPFLLP-------DHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFN 445
Fly 446 TPPGLTEDQLIGIFNIKDVP-ATSVRLFPLKTERSSSGLIEFSNISQAVLAIMKCNHLPIEGKGT 509
Fly 510 KFPFIMKLCFSSSK 523 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sm | NP_001246428.1 | RRM2_hnRNPL_like | 80..165 | CDD:241138 | 59/84 (70%) |
RRM3_hnRNPL_like | 319..390 | CDD:240870 | 36/70 (51%) | ||
RRM4_hnRNPL_like | 437..519 | CDD:240873 | 32/82 (39%) | ||
Hnrnpl | XP_006228753.3 | hnRNP-L_PTB | 145..669 | CDD:273733 | 197/534 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166343590 | |
Domainoid | 1 | 1.000 | 117 | 1.000 | Domainoid score | I5760 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1456 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H1174 | |
Inparanoid | 1 | 1.050 | 297 | 1.000 | Inparanoid score | I2637 |
OMA | 1 | 1.010 | - | - | QHG48602 | |
OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002729 | |
OrthoInspector | 1 | 1.000 | - | - | otm46151 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104479 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1821 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.710 |