Protein Alignment sm and Hnrnpll

DIOPT Version :10

• Sequence 1: NP_001246428.1
• Gene: sm / 37254
• FlyBaseID: FBgn0003435
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: XP_233805.5
• Gene: Hnrnpll / 313842
• RGDID: 1305861
• Length: 591
• Species: Rattus norvegicus
• Alignment Length: 480
• Identity: 182/480 - (37%)
• Similarity: 253/480 - (52%)
• Gaps: 90/480 - (18%)

  Fly    58 QQALMNKSNDDLRRKRPETTRP----NHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKN 118
            |||..|.|... |..||..|..    |.:||.:|.||.||||||||:.:|:|.|:|.||||||:|
  Rat   190 QQAFFNYSTSK-RITRPGNTDDPSGGNKVLLLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRN 253

  Fly   119 GVQAMVEFDNLDAATRARENLNGADIYAGCCTLKIDYAKPEKLNVYKNEPDTSWDYTLSTVKEIG 183
            |:||||||:::..|.:|:..|||||||||||||||:||:|.:|||.:|:.| |||||
  Rat   254 GIQAMVEFESVLCAQKAKAALNGADIYAGCCTLKIEYARPTRLNVIRNDND-SWDYT-------- 309

  Fly   184 NGRSPLLQEPLYVATLSTPQQHVSHQHHHHLRQQQQQQHQQQAPQQQPHPQHLHHQQQLVAPAQS 248
               .|.|.                       |:.:.:..|:||.... ||....|.
  Rat   310 ---KPYLG-----------------------RRDRGKGRQRQAILGD-HPSSFRHD--------- 338

  Fly   249 HNLYQFKEPPLLGPGAAFPPFGAPEYH----TTTPENWKGAAIHPTGLMKEPAGVVPGRNAPVAF 309
                        |.|:..|....|..:    ..|||           |:..|   :|  .|..::
  Rat   339 ------------GYGSHGPLLPLPSRYRMGSRDTPE-----------LVAYP---LP--QASSSY 375

  Fly   310 TPQGQAQGAVMMVYGLDHDTSNTDKLFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQH 374
            ...|...|:|:||.||.....|..::|||.|||||:.::||:||..|||:|:|||..||||.|.|
  Rat   376 MHGGSPSGSVVMVSGLHQLKMNCSRVFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTH 440

  Fly   375 LNNIPVGTGGKIQIAFSKQNFL--SEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPP 437
            |||:.: .|.::.:..|||:.:  |::   |.|.|.:.|:|::..||||||.|..|||||.||||
  Rat   441 LNNVKL-FGKRLNVCVSKQHSVVPSQI---FELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPP 501

  Fly   438 SKILHFFNTPPGLTEDQLIGIFNIKDV-PATSVRLFPLK-TERSSSGLIEFSNISQAVLAIMKCN 500
            |.:||::|.|..:||:....:.|..:| |....::|..| :.::.|||:|:...:.||.|:...|
  Rat   502 SCVLHYYNVPLCVTEETFTKLCNDHEVLPFIKYKVFDAKASAKTLSGLLEWKCKTDAVEALTALN 566

  Fly   501 HLPIEGKGTKFPFIMKLCFSSSKSM 525
            |..|.......|:.:|||||:|..:
  Rat   567 HYQIRVPNGSNPYTLKLCFSTSSHL 591

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sm	NP_001246428.1	hnRNP-L_PTB	45..522	CDD:273733	181/475 (38%)
Hnrnpll	XP_233805.5	hnRNP-L_PTB	123..590	CDD:273733	182/477 (38%)