Sequence 1: | NP_001246428.1 | Gene: | sm / 37254 | FlyBaseID: | FBgn0003435 | Length: | 552 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_877970.1 | Gene: | Smptb / 302879 | RGDID: | 727953 | Length: | 588 | Species: | Rattus norvegicus |
Alignment Length: | 441 | Identity: | 113/441 - (25%) |
---|---|---|---|
Similarity: | 185/441 - (41%) | Gaps: | 77/441 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 82 ILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIY 145
Fly 146 AGCCTLKIDYAKPEKLNV-YKNE-------PDTSWDYTLSTVKEIGNGRSPLLQEPLYVATLSTP 202
Fly 203 QQHVSHQHHHHLRQQQQQQHQQQAPQQQP------HPQHLHHQQQLVAPAQSHNLYQFKEPPLLG 261
Fly 262 PGAAFPPFGAPEYHTTTPENWKGAAIHPTGLMKEPAGVVPGRNAPVAFTPQGQAQGAVMMVYGLD 326
Fly 327 HDTSNTDKLFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFS 391
Fly 392 KQNFLSEVINPFLLP----DHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTE 452
Fly 453 DQLIGIFNIKDVPATSVRLFPLKTERSSSGLIEFSNISQAVLAIMKCN-HL 502 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sm | NP_001246428.1 | RRM2_hnRNPL_like | 80..165 | CDD:241138 | 31/84 (37%) |
RRM3_hnRNPL_like | 319..390 | CDD:240870 | 23/70 (33%) | ||
RRM4_hnRNPL_like | 437..519 | CDD:240873 | 18/67 (27%) | ||
Smptb | NP_877970.1 | hnRNP-L_PTB | 27..588 | CDD:273733 | 113/441 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1545178at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |