Protein Alignment sm and sm

DIOPT Version :10

• Sequence 1: NP_001246428.1
• Gene: sm / 37254
• FlyBaseID: FBgn0003435
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: XP_061514876.1
• Gene: sm / 1280613
• VectorBaseID: AGAMI1_001350
• Length: 516
• Species: Anopheles gambiae
• Alignment Length: 558
• Identity: 341/558 - (61%)
• Similarity: 398/558 - (71%)
• Gaps: 73/558 - (13%)

  Fly     3 YNGASNGSGASGAGGGGATIVVTEGPQNKKIRTGVQQPGENDVHMHARSTPQQNQQQALMNKSN- 66
            :||   ||.|.|.||||     .:||.||::.|| |:.||  |.:::|:           |.:|
Mosquito     6 FNG---GSAAGGGGGGG-----QDGPHNKRLCTG-QEMGE--VPLNSRN-----------NNNNI 48

  Fly    67 ---DDLRRKRPETTRPNHILLFTIINPFYPITVDVLHKICHPHGQVLRIVIFKKNGVQAMVEFDN 128
               |:.||||...|||||||||||:||.|||||||||.||||:|||.|||||||||||||||||:
Mosquito    49 NVTDEPRRKRDVATRPNHILLFTILNPIYPITVDVLHTICHPNGQVQRIVIFKKNGVQAMVEFDS 113

  Fly   129 LDAATRARENLNGADIYAGCCTLKIDYAKPEKLNVYKNEPDTSWDYTL---STVKEIGNGRSPLL 190
            :::||||:::|||.|||:||||||||||||||||||||:.|:||||||   :||||:||||||||
Mosquito   114 IESATRAKDSLNGCDIYSGCCTLKIDYAKPEKLNVYKNDSDSSWDYTLVAATTVKEVGNGRSPLL 178

  Fly   191 QEPLYVATL--STPQQHVSHQHHHHLRQQQQQQHQQQAPQQQPHPQHLHHQQQLVAPAQSHNLYQ 253
            |:|    ||  ..||.:..:                .:|...|:.::..       |.|...
Mosquito   179 QDP----TLFGGRPQPYSKY----------------LSPSHTPYNEYSQ-------PTQGTR--- 213

  Fly   254 FKEPPLLGPGA--AFPP-FGAPEYHTTTPENWKGAA--IHPTGLMKEPAGVVPGRNAPVAFTPQG 313
             .:|.|||.|.  .||| |..|::|.:  ||||.||  .| .||||:|.  :| ||.|..|....
Mosquito   214 -SKPALLGAGGGNGFPPNFSPPDFHPS--ENWKPAAAGTH-VGLMKDPP--LP-RNGPTNFIQPT 271

  Fly   314 QAQGAVMMVYGLDHDTSNTDKLFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNI 378
            |.|||||||||||:.|:||||||||.||||||.|||||||||||||||||||:||||||||||||
Mosquito   272 QQQGAVMMVYGLDNGTANTDKLFNLFCLYGNVVRIKFLKTKEGTAMVQMGDAIAVERCVQHLNNI 336

  Fly   379 PVGTGGKIQIAFSKQNFLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHF 443
            |:|..||||||||||||||||.||:.||||:||||||||||||||||..||||||||||||||||
Mosquito   337 PIGNDGKIQIAFSKQNFLSEVTNPYTLPDHTPSFKEYTGSKNNRFLSLTQASKNRIQPPSKILHF 401

  Fly   444 FNTPPGLTEDQLIGIFNIKDVPATSVRLFPLKTERSSSGLIEFSNISQAVLAIMKCNHLPIEGKG 508
            ||||||||::|||..|...|...:.||:||||:|||||||:||.:::.||.|||||||..|:.||
Mosquito   402 FNTPPGLTDEQLIAAFGSNDCHPSQVRMFPLKSERSSSGLVEFPSVALAVQAIMKCNHTAIDHKG 466

  Fly   509 TKFPFIMKLCFSSSKSMNGAWNNAASEGMIEKENEVDT 546
            |||||||||||||||:|||||||...|.|.:..:.|.|
Mosquito   467 TKFPFIMKLCFSSSKTMNGAWNNENIENMKQAGSVVQT 504

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sm	NP_001246428.1	hnRNP-L_PTB	45..522	CDD:273733	308/490 (63%)
sm	XP_061514876.1	None