Protein Alignment sm and ptbp3

DIOPT Version :10

• Sequence 1: NP_001246428.1
• Gene: sm / 37254
• FlyBaseID: FBgn0003435
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: XP_012811881.1
• Gene: ptbp3 / 100145652
• XenbaseID: XB-GENE-988703
• Length: 530
• Species: Xenopus tropicalis
• Alignment Length: 509
• Identity: 140/509 - (27%)
• Similarity: 211/509 - (41%)
• Gaps: 117/509 - (22%)

  Fly    43 NDVHMHARSTPQQNQQQALMNKSNDDLRRKRPETTRP----------NHILLFTIINPFYPITVD 97
            |...:...:.|.|.:.||.:...|.........|:.|          :.:|...:.|.|||:|::
 Frog   112 NHRELKTDNLPNQARAQAALQAVNTLQSGGLTLTSVPGGEGLVLSGQSPVLRIIVENLFYPVTLE 176

  Fly    98 VLHKICHPHGQVLRIVIFKKNG-VQAMVEFDNLDAATRARENLNGADIYAGCCTLKIDYAKPEKL 161
            |||:|....|.|::|:.|.||. .||::::.:...|..|:..|:|.:||..||||:|:::|...|
 Frog   177 VLHQIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTSL 241

  Fly   162 NV-YKNEPDTSWDYT---LSTVKEIGNGRSPLLQEPLYVA-----TLSTPQQHVSHQHHHHLRQQ 217
            || |.|  |.|.|:|   |.|    |:|: |.|...:..|     .:|:|....:.
 Frog   242 NVKYNN--DKSRDFTRLDLPT----GDGQ-PSLDTTMAAAFGAPGIISSPYAGAAG--------- 290

  Fly   218 QQQQHQQQAPQQQPHPQHLHHQQQLVAPAQSHNLYQFKEPPLLGPGAAFPPFGAPEYHTTTPENW 282
                                     .|||     ..|.:..|..||.  |..| |...||
 Frog   291 -------------------------FAPA-----IGFPQAGLSVPGV--PGLG-PLALTT----- 317

  Fly   283 KGAAIHPTGLMKEPA-GVVPGRNAPVAFTPQGQAQGAVMMVYGLDHDTSNTDKLFNLVCLYGNVA 346
              :||  ||.|..|. ..:||.              :|::|..|:.|......||.|..:||:|.
 Frog   318 --SAI--TGRMAIPGMTAIPGH--------------SVLLVSNLNPDAILPHGLFILFGVYGDVQ 364

  Fly   347 RIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQNFLSEVINPFLLP----D 407
            |:|.|..|:..|:|||.||...:..:.|||...: .|..::|..||...:.       ||    :
 Frog   365 RVKILFNKKENALVQMTDATQAQLAMSHLNGQRL-HGRVLRITLSKHQSVQ-------LPREGHE 421

  Fly   408 HSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQLIGIFNIKDVPATSVRLF 472
            .....|:||.|..:||..|...:...|.|||..||..|.||.:|::.|..:|   .....||:.|
 Frog   422 DQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLF---ASTGCSVKGF 483

  Fly   473 PLKTERSSSGLIEFSNISQAVLAIMKC-NHLPIEGKGTKFPFIMKLCFSSSKSM 525
            ....:.....||:..::.:|:||:::. ||...|....:..|        ||||
 Frog   484 KFFQKDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSF--------SKSM 529

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sm	NP_001246428.1	hnRNP-L_PTB	45..522	CDD:273733	135/502 (27%)
ptbp3	XP_012811881.1	hnRNP-L_PTB	37..530	CDD:273733	140/509 (28%)