DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir56d and Ir100a

DIOPT Version :9

Sequence 1:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:604 Identity:105/604 - (17%)
Similarity:221/604 - (36%) Gaps:139/604 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EHHL------GIPMMQFISTPSLVMVFTTGKDD-----PIMELASHNQQGIHWLKTI-------- 130
            |.||      |..::||:......::.:..:::     .||........|:|.::.|        
  Fly    41 ELHLRTSEDGGNDLVQFLMQEKSSIIISAKQEEVPSRAKIMRHHFFIFDGVHQMQEIRTSLFNTD 105

  Fly   131 --FVLFPSLQSRDFETNPESLAQFTAEIKDVYDWVWRKQFINTFLITIKDNVFILDPYPTPSIVN 193
              ::|  :|::...| :...|.:|.|::     |:........::...|.:|.:.:|:     :.
  Fly   106 GFYIL--ALENNTIE-DDVLLMEFAADV-----WLQHGHSRIYYVQLSKKSVLLFNPF-----LQ 157

  Fly   194 KTGVWQAEEFFHKYAKNMKGYLVRTPILYDMPRVFKSDRPTNRYEKNFIHGTSGNLFLGFLEFVN 258
            :..|.|..:.:.:..|:::||.:|   :|....|:.|           :.|...|..|. :...:
  Fly   158 RLVVVQDSKTYSRIYKDLEGYHLR---IYIFDSVYSS-----------VIGDGENKVLS-VTGAD 207

  Fly   259 ATLMDTSA---NVTADYL---------NMTN-------------LLDLVSQGVYETLIHSFTEIT 298
            |.|..|.|   |.|||::         .:.|             .:|::..|.:   |..:  :|
  Fly   208 AKLAKTVARQLNFTADFVWPDDEFFGGRLANGEYSGGVGRAHRGEVDIIFAGFF---IKDY--LT 267

  Fly   299 TKFVVSYSYPIGINDCCIMVPYRNQSPADQYMHEALQENVWVLISLFTLYITVAIYLCSPLRPRD 363
            |.  :.:|..:.:::.|:.|....:.|.......|:..:||:...|..| :...::|.  ||..:
  Fly   268 TH--IQFSAAVYMDELCLYVKKAQRIPQSILPLFAVHMDVWLCFLLVGL-LGALVWLI--LRAVN 327

  Fly   364 LSAAFLQSI------CTLTY-------SVPTFII-------RTPTLRMRYLYIL-LAIWGIVTSN 407
            |... ::.:      ..::|       .|.|::|       |.|......:::. |.:..::...
  Fly   328 LILG-IEGVPDGSRATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGA 391

  Fly   408 LYISRMTSYFTTAPPVRQINTVQDVVEAN--LRIKMLAIE-----------YERMAKSPLQYPES 459
            |..|.:.:.:......|.:||::::.|:.  :.||..|.:           |.|:....:...|.
  Fly   392 LLESSLATVYIRPLYYRDVNTLRELDESGQPIYIKHPAFKDDLFYGHNSEVYRRLDAKMMLVAEG 456

  Fly   460 YLNQVDLVDKHMLDLHRDPFNTSFGYTVSSDRWRFLNLQQLH--LRKPIFRLTEICEGPFYHVFP 522
            ....:::|.|      |..|   .|.|.|:.    |.|..:.  :.|.:.::.| |...::..:.
  Fly   457 EERLIEMVSK------RGGF---AGVTRSAS----LQLSDIRYVMTKKVHKIPE-CPKNYHIAYV 507

  Fly   523 LHKDSHMRSVMTEYIMIAQQAGLMNHWERE----TFWEAVHLHRIHVHLFDDEPMALSLDFFSSL 583
            |.:.|.....:...::.....|::..|..|    ..|...........|.......|:|......
  Fly   508 LPRPSPYLEEVNRIVLRLVAGGIVGLWTGEAKERAKWSIQRFPEYLAELDVGRWKVLTLSDVQLA 572

  Fly   584 LRTWTLGLILAGLAFAAEM 602
            ....|:|.:|:.:...||:
  Fly   573 FYALTIGCLLSAIVCMAEI 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 21/130 (16%)
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 8/44 (18%)
Lig_chan <439..580 CDD:278489 25/154 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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