DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir56d and Ir68a

DIOPT Version :9

Sequence 1:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:735 Identity:129/735 - (17%)
Similarity:229/735 - (31%) Gaps:264/735 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RNIFP-----TNGSDNITLLNNMFVLEMFYR-----------ITQL--YHFKNFIFYISERLDLN 59
            |.:.|     ||.||::...:..  :|:|.:           ||.|  :..:.|:.||.:...||
  Fly    76 RRVIPFFVMRTNESDDLQRPSRQ--VELFVKAIKSSDCELNVITILNGWQVQRFLGYIYDNRSLN 138

  Fly    60 NKDSQEFFH----------NFWTYFPMAPNLIITREHHLGIPMMQFISTPSLVMVFTTGKDDPIM 114
            .:......|          :.|:.|..|  :.:.|:    :.....|||                
  Fly   139 MQKKFVLLHDLRLFESDMIHLWSVFIDA--IFLKRQ----LDNKYTIST---------------- 181

  Fly   115 ELASHNQQGIHWLKTIFVLFPSLQSRDFETNPESLAQFTAEIKDVYDWVWRKQFINTFLITIK-D 178
                             :.||.:.|.            ...:|::.:|...|......|...| .
  Fly   182 -----------------IAFPGILSG------------VLVMKNIANWELGKGLNGRILFADKTS 217

  Fly   179 NVF-------ILDPYPTPSIVNKTGVWQAEEFFHKYAKNMKGYLVRTPILYDMPR---------- 226
            |:|       |.:..|.....|.|..:|..|.   ...|..|..:....:|..|.          
  Fly   218 NLFGTSLPVAISEHVPMVLWANATKSFQGVEV---EIMNALGKALNFKPVYYKPNQTENMDWTEL 279

  Fly   227 ------VFKSDRPTNRYEKNFIHGTSGNLFLGFLEFVNATLMDTSANVTADYLNMTNLLDLVSQG 285
                  .:.|..| :.|.:|..|             :::.|:|..|..:|.:.    :.||....
  Fly   280 DGGASVAYGSGNP-DGYAQNGTH-------------IDSMLVDEVAAHSARFA----IGDLHLFQ 326

  Fly   286 VYETLI-----HSFTEIT------------TKFVVSYS------------------YPIGINDCC 315
            ||..|:     |:|..:|            ..|::.:|                  |.|...:..
  Fly   327 VYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLNAI 391

  Fly   316 I-----------MVPYRNQSPADQYMHEALQENVWVLISLFTLYITVAIYLCS--PLRPRDLSAA 367
            |           :.|.|| .|.|..::..:           :..|.::.|..|  ...||||...
  Fly   392 INGNVSSEFFRCLRPNRN-VPMDPKIYRRI-----------SFRIAISRYRSSKGDRMPRDLFDG 444

  Fly   368 FLQSICTLTYSVPTFIIRTPTLRMRYLYILLAIWGIVTSNLYISRMTSYFTTA---PPVR-QINT 428
            :...| .||||:..: :..|.:...:...:|..|..:...|.::...:.||..   |..| .|:|
  Fly   445 YTNCI-LLTYSMLLY-VALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDT 507

  Fly   429 VQDV------------------VEANLRI------KMLAIEY-----ERMAKSPLQY--PESYLN 462
            ::|:                  :|||..:      ||....|     .|:||....|  .|.||.
  Fly   508 LEDLLRSHIPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSRIAKGQCAYYDNEFYLR 572

  Fly   463 QVDLVDKHMLDLHRDPFNTSFGYTVSSDRWRFLNLQQLHLRKPIFRLTEICEGPFYHVFPLHKDS 527
            .:.:.|:....||                    .:::..|..|:             |..:.|:|
  Fly   573 YLRVADESGSALH--------------------IMKECVLYMPV-------------VLAMEKNS 604

  Fly   528 HMRSVMTEYIMIAQQAGLMNHWERETFWEAVHLHRIHVHLFDDEPMALSLDFFSSLLRTWTLGLI 592
            .::..:...|....:.||:..|.::.      :..:.......:...:::..|.|......:|.:
  Fly   605 ALKPRVDASIQHLAEGGLIAKWLKDA------IEHLPAEALAQQEALMNIQKFWSSFVALLIGYV 663

  Fly   593 LAGLAFAAEMKWH-EHVTFK 611
            ::.|...|| :|| :|:..|
  Fly   664 ISMLTLLAE-RWHFKHIVMK 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 24/125 (19%)
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 49/272 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.