DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir56d and Ir56c

DIOPT Version :9

Sequence 1:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:638 Identity:147/638 - (23%)
Similarity:260/638 - (40%) Gaps:140/638 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLNNMFVLEMFYRITQLYHFKNFIFYIS--ERLD---------------------LNNKDSQEFF 67
            |||   :|..|.|:..   |:..::::|  :|||                     :||.......
  Fly     4 LLN---LLAPFGRMNV---FQEIVWFVSPHQRLDQLDEFIMRIDEAFGKSATQTVVNNNTEMRMI 62

  Fly    68 HNFWTYFPMAPNLIITREHHLGIPMMQFISTPSLVMVFTTGKDDPIMELASHNQQGIHWLKTIFV 132
            ::            ..|.:|:.             .|||||.:||||::.|....|.|:..::.:
  Fly    63 YS------------SARRNHMS-------------FVFTTGAEDPIMKVFSKVLLGRHFYVSMVI 102

  Fly   133 LFPSLQSRDFETNPESLAQFTAEIKDVYDWVWRKQFINTFL----ITIKDNVFILDPYPTPSIVN 193
            ....:.    :.:|         |.|:..:.:.:||.|:.:    :...:.:|.:..:|..|..|
  Fly   103 YVDKVG----DMHP---------IYDLLTFAYNQQFFNSMVHFESMEGVNQLFGVSKFPVMSFEN 154

  Fly   194 KTG-------VWQAEEFFHKYAKNMK----GYLVRTPILYDMPRVFKSDRPTNRYEKNFIHGTSG 247
            :|.       :|       |..:|.:    |:...||:..|:|.:|:|.   ..|:     |::.
  Fly   155 RTDFLKYMGKIW-------KQVQNARSDVGGFGFTTPLRQDLPHLFQSQ---GHYD-----GSTY 204

  Fly   248 NLFLGFLEFVNAT---LMDTSANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPI 309
            .:...|:.|:|.:   |:....::....:||.:.|.|:.:...|...|::....:...:..|||:
  Fly   205 RIIETFVRFINGSFKELIMPPDSLGGQVINMKDALQLIRERKMEFCAHAYALFMSDEELEKSYPL 269

  Fly   310 GINDCCIMVPYRNQSPADQYMHEALQENVWVLISLFTLYITVAIYLCSPLRPR------DLSAAF 368
            .:...|:|||..|......|..:....|||    .|.|...:|:.|...:..|      ....|.
  Fly   270 LVVQWCLMVPLYNSVSTYFYPLQPFDWNVW----FFALGALLALVLLELMWLRMFGGWSGYRGAV 330

  Fly   369 LQSICTLTYSVPTFIIRTP-------TLRMRYLYILLAIW-GIVTSNLYISRMTSYFTTAPPVRQ 425
            |.|.|        :||..|       ...:|:|.:....: |...|..|.|.:.|..|......|
  Fly   331 LNSFC--------YIINVPIEGQLQQPCLLRFLLLATVFFHGFFLSAYYTSNLGSILTVNLFHAQ 387

  Fly   426 INTVQDVVEANLRIKMLAIEYERMAKSPLQYPESYLNQVDLVDKHMLDLHRDPFNTSFGYTVSSD 490
            |||:.|:|.|.|.:.::..|.|.:.....:.|:.:|..:..||..:...|:..||:||.|.|:.|
  Fly   388 INTMNDIVSAQLPVMIIDYEMEFLLNLNKELPQEFLELLRPVDSAVFSEHQTSFNSSFAYFVTED 452

  Fly   491 RWRFLNLQQLHLRKPIFRLTEICEGPFYHVFPLHKDSHMRSVMTEYIMIAQQAGLMNHWERETFW 555
            .|.||:.||.||::.:|:|:.||.|.::..|||..||.:...:..:......:||:|.:.|.:|.
  Fly   453 HWEFLDEQQKHLKQRLFKLSSICFGSYHLAFPLQMDSSLWRDIEYFTFRIHSSGLLNFYARSSFG 517

  Fly   556 EAVHLHRIHVHLFDDEPMALSLDFFSSLLRTWTLGLI-------LAGLAFAAE 601
            .|:|...:       :.|..:.::.|:.|:...:..|       |||:.|..|
  Fly   518 SALHAGLV-------QRMPDTQEYTSAGLQHLAIAFILLLVMSFLAGIVFVLE 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 29/123 (24%)
Ir56cNP_611431.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CJJD
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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