DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir56d and Ir48c

DIOPT Version :9

Sequence 1:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:495 Identity:111/495 - (22%)
Similarity:195/495 - (39%) Gaps:82/495 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 FTTGKDDPIMELASHNQQGIHWLKTIFVLFPSLQSRDF------ETNPESLAQFTAEIKDVYDWV 163
            |.|..|:|::.:....:.....|.|:.||...|..|.:      :.:.|:|..: .:|:..|   
  Fly    68 FKTYHDEPVLIIIRLERDLNLNLATLDVLRSYLTDRQYNDILLIDNDEENLNSY-VDIRKAY--- 128

  Fly   164 WRKQFINTFLITIKDNVFILDPYPTPSIVNKTGVWQAEEFFHKYAKNMKGYLVRTPILYDMPRVF 228
            |...|....:...:...:.:.|||...| ..|.:  .|...::..:|:.||.:|..:..|.|..|
  Fly   129 WNAGFSQVLIYNSQQRTWSIKPYPYLQI-RPTSL--KEYIENRNTRNLMGYPLRVLVTNDPPHCF 190

  Fly   229 --KSDRP--TNRYEKNFIHGTSGNLFLGFLEFVNATLMDTSAN--------VTADYLNMTNLLDL 281
              |.:.|  .|||:     |:...:...|.:.:|||.   .||        .|||.:.|.:..::
  Fly   191 VDKDELPGSPNRYK-----GSIVTMLKIFADQLNATF---QANPFREFRRYSTADCVQMVSDDEI 247

  Fly   282 VSQGVYETLIHSFTEITTKFVVSYSYPIGINDCCIMVPYRNQSPADQYMHEALQENVWVLISLFT 346
            .:.|  ...|.::|..|       |.|:.:|...||.|:.|......|........||:...:..
  Fly   248 DACG--SIFIRTYTYAT-------SQPVRLNRVVIMAPFGNPIEKFYYFFRPFDLYVWIGTGIIV 303

  Fly   347 LYITVAIYLCSPLRPRDLSAAFLQSICTLTYSVPTFIIRTPTL-------RMRYLYILLAIWGIV 404
            :||.|...|......::.:....     |..:|.|.:.|..:|       :...|.:|.|| |.:
  Fly   304 VYIAVMGSLLHRWHFKEWNVGQY-----LLLAVQTLLNRELSLPQSSSGSKFMLLLLLFAI-GFI 362

  Fly   405 TSNLYISRMTSYFTTAPPVRQINTVQDVVEANLRIKMLA--IEYERMAKSPLQYPESYLNQVDLV 467
            .||||::.::...||....|.|..:.|:..||:.|.:..  |....:..|..:..|.:|    ||
  Fly   363 LSNLYVALLSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSVYGSSEELRERFL----LV 423

  Fly   468 DKHMLDLHRDPFNTSFGYTVSSDRWRFLNLQQLHLRKPIFRLTEICEGPFY----------HVFP 522
            ::......|:..:.|:.|..|.||..|...||..||:.  |:.::.....|          .|..
  Fly   424 EESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLRRR--RMKKLSNPVGYTWAVQVIKQNWVLE 486

  Fly   523 LHKDSHMR---------SVMTEYIMIAQQAGLMNHWERET 553
            .|.:.|::         .::.:...:|.:||.::.:..:|
  Fly   487 KHYNDHVQRFFETGLQNKLVDDVHELAVKAGFLHFFPTQT 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 28/116 (24%)
Ir48cNP_610700.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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